| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0504 |
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| Symbol | |
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| ID | 3579915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 571138 |
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| End bp | 571713 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637684192 |
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| Product | RNA polymerase sigma factor SigE |
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| Protein accession | YP_288565 |
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| Protein GI | 72160908 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.221643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCAGACC CAGCCCCTGC CGCCGACTTC GGCCATTGGG AGCCGCCAAG CTGGGAAGAG
GTGGTACGCA CCCACTCGGC TCGGGTCTAC CGGCTCGCCT ACCGGCTGAC CGGCAACCAG
CACGACGCTG AAGACCTCAC CCAGGAGGTC TTCATCCGCG TCTTCCGGTC GCTGGCCAAC
TACACTCCCG GAACCTTCGA GGGGTGGCTG CACCGCATCA CCACCAACCT GTTCCTCGAC
ATGGCGCGGC GCCGTTCCCG CATCCGCTTC GAAGGACTCG CGGAAACCGC CAACGACCGT
CTCGAGGGTC GGGAACCCTC CCCCGCGCAG GCTTACGACG ACCGCCACTT CGACGCCGAC
GTGCAGGCCG CACTCGACGC ACTCTCCCCC GAGTTCCGCG CCGCCGTTGT GCTGTGTGAC
ATCGAAGGGC TCTCCTACGA GGAGATCGCC GCCACTCTGG GAGTGAAGCT GGGCACGGTG
CGCAGCCGAA TCCACCGCGG CCGAGCCCAA CTCCGCGCCG CGCTGCAGCA CCGCCGCCAG
GCAGCCGAAC GGGTCGGGGA GGTCACGGAA GCATGA
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| Protein sequence | MADPAPAADF GHWEPPSWEE VVRTHSARVY RLAYRLTGNQ HDAEDLTQEV FIRVFRSLAN
YTPGTFEGWL HRITTNLFLD MARRRSRIRF EGLAETANDR LEGREPSPAQ AYDDRHFDAD
VQAALDALSP EFRAAVVLCD IEGLSYEEIA ATLGVKLGTV RSRIHRGRAQ LRAALQHRRQ
AAERVGEVTE A
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