Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0492 |
Symbol | |
ID | 3579903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 559260 |
End bp | 560372 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637684180 |
Product | N-succinyldiaminopimelate aminotransferase |
Protein accession | YP_288553 |
Protein GI | 72160896 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03539] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.711349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAGC GGCGCCCGGT GGCTGACCGG CTACCGACCT TCCCGTGGGA CCGGTTGGCA CCGTACAAAG AGACCGCAGC GCAGCATCCC GACGGGATCG TCGACTTGTC GGTGGGCACC CCGGTGGACC CGGTGCCCCC GCGGCTGCGC GCGGCACTAG CCGAGGCCGC GGACACCCCC GGATACCCGC AGACGTACGG CACGCGGGCG CTGCGGGAGT CCATCAGCGG CTGGTTGGCG CGCCGCCACC AGGTGCAGGT GGACCCGGAC GCCACCCTGC CCACCATCGG CTCTAAGGAA CTGGTGGCCT GGCTGCCCAC CCTGCTGGGA CTGGGCCCGG GCGACACCGT GGTTTTCCCG GAACTGGCCT ACCCCACCTA TGACGTCGGG GCTCGTATCG CGGGGGCCAC GCCGGTCGCG GCCGACTCGC TCACCCAGTT AGGGCCGGTC CGCCCCGGAC TGCTGTGGAT CAACTCTCCG GCTAACCCCA CCGGCCGGGT CCTCGGACTC GAGCACTTGC GGAAAGTCGT GTCCTGGGCG CGGGAACGCG GGGTAGTGGT CGCCTCCGAC GAGTGCTACC TGGAACTGGG CTGGGAAGGG GAGCGGCCCC TGTCGATCCT CCACCCCGAG GTGTGCGGCG GCTCCCACGA AGGGCTGCTC GCCGTGCACT CCCTGTCGAA GCGTTCCAAC CTGGCCGGGT ACCGGGCGGG TTTCGTGGCC GGCGACCCGG CCCTCGTCCA GCAGCTGCTC CAGGCCCGCA AGCACGCCGG GATGATGGTG CCCGCCCCCG TGCAGGCGGC GATGCGGGCG GCGCTCGACG ACGACGAGCA CGCTGAAGAG CAGAAGCAGC GCTATGCGGC CCGCCGCACC CAGTTGCGCG ACGCATTGGA GAAAGCCGGC TGGCAGATCA CGCATTCGGA AGCCGGGCTG TACCTGTGGG CGAGCCACCC CGACTATGAC GCGTGGGGCT CGGTGCGGGT GCTGGCCGAG CAGGGCATCC TGGTCGCTCC GGGCGAGTTC TACGGCCCGG CGGGGGCCCG GCACGTCCGG GTGGCGTTCA CCGCCACCGA CGAGCGGGTG GCGGCCGCGG TCAAACGGCT CGCGGAACTG TAG
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Protein sequence | MAERRPVADR LPTFPWDRLA PYKETAAQHP DGIVDLSVGT PVDPVPPRLR AALAEAADTP GYPQTYGTRA LRESISGWLA RRHQVQVDPD ATLPTIGSKE LVAWLPTLLG LGPGDTVVFP ELAYPTYDVG ARIAGATPVA ADSLTQLGPV RPGLLWINSP ANPTGRVLGL EHLRKVVSWA RERGVVVASD ECYLELGWEG ERPLSILHPE VCGGSHEGLL AVHSLSKRSN LAGYRAGFVA GDPALVQQLL QARKHAGMMV PAPVQAAMRA ALDDDEHAEE QKQRYAARRT QLRDALEKAG WQITHSEAGL YLWASHPDYD AWGSVRVLAE QGILVAPGEF YGPAGARHVR VAFTATDERV AAAVKRLAEL
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