| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0492 |
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| Symbol | |
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| ID | 3579903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 559260 |
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| End bp | 560372 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637684180 |
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| Product | N-succinyldiaminopimelate aminotransferase |
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| Protein accession | YP_288553 |
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| Protein GI | 72160896 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03539] succinyldiaminopimelate transaminase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.711349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCGAGC GGCGCCCGGT GGCTGACCGG CTACCGACCT TCCCGTGGGA CCGGTTGGCA
CCGTACAAAG AGACCGCAGC GCAGCATCCC GACGGGATCG TCGACTTGTC GGTGGGCACC
CCGGTGGACC CGGTGCCCCC GCGGCTGCGC GCGGCACTAG CCGAGGCCGC GGACACCCCC
GGATACCCGC AGACGTACGG CACGCGGGCG CTGCGGGAGT CCATCAGCGG CTGGTTGGCG
CGCCGCCACC AGGTGCAGGT GGACCCGGAC GCCACCCTGC CCACCATCGG CTCTAAGGAA
CTGGTGGCCT GGCTGCCCAC CCTGCTGGGA CTGGGCCCGG GCGACACCGT GGTTTTCCCG
GAACTGGCCT ACCCCACCTA TGACGTCGGG GCTCGTATCG CGGGGGCCAC GCCGGTCGCG
GCCGACTCGC TCACCCAGTT AGGGCCGGTC CGCCCCGGAC TGCTGTGGAT CAACTCTCCG
GCTAACCCCA CCGGCCGGGT CCTCGGACTC GAGCACTTGC GGAAAGTCGT GTCCTGGGCG
CGGGAACGCG GGGTAGTGGT CGCCTCCGAC GAGTGCTACC TGGAACTGGG CTGGGAAGGG
GAGCGGCCCC TGTCGATCCT CCACCCCGAG GTGTGCGGCG GCTCCCACGA AGGGCTGCTC
GCCGTGCACT CCCTGTCGAA GCGTTCCAAC CTGGCCGGGT ACCGGGCGGG TTTCGTGGCC
GGCGACCCGG CCCTCGTCCA GCAGCTGCTC CAGGCCCGCA AGCACGCCGG GATGATGGTG
CCCGCCCCCG TGCAGGCGGC GATGCGGGCG GCGCTCGACG ACGACGAGCA CGCTGAAGAG
CAGAAGCAGC GCTATGCGGC CCGCCGCACC CAGTTGCGCG ACGCATTGGA GAAAGCCGGC
TGGCAGATCA CGCATTCGGA AGCCGGGCTG TACCTGTGGG CGAGCCACCC CGACTATGAC
GCGTGGGGCT CGGTGCGGGT GCTGGCCGAG CAGGGCATCC TGGTCGCTCC GGGCGAGTTC
TACGGCCCGG CGGGGGCCCG GCACGTCCGG GTGGCGTTCA CCGCCACCGA CGAGCGGGTG
GCGGCCGCGG TCAAACGGCT CGCGGAACTG TAG
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| Protein sequence | MAERRPVADR LPTFPWDRLA PYKETAAQHP DGIVDLSVGT PVDPVPPRLR AALAEAADTP
GYPQTYGTRA LRESISGWLA RRHQVQVDPD ATLPTIGSKE LVAWLPTLLG LGPGDTVVFP
ELAYPTYDVG ARIAGATPVA ADSLTQLGPV RPGLLWINSP ANPTGRVLGL EHLRKVVSWA
RERGVVVASD ECYLELGWEG ERPLSILHPE VCGGSHEGLL AVHSLSKRSN LAGYRAGFVA
GDPALVQQLL QARKHAGMMV PAPVQAAMRA ALDDDEHAEE QKQRYAARRT QLRDALEKAG
WQITHSEAGL YLWASHPDYD AWGSVRVLAE QGILVAPGEF YGPAGARHVR VAFTATDERV
AAAVKRLAEL
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