Gene Tfu_0447 details

Gene Information

• Locus tag: Tfu_0447
• Symbol: greA
• ID: 3579838
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 507062
• End bp: 507565
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637684135
• Product: transcription elongation factor GreA
• Protein accession: YP_288508
• Protein GI: 72160851
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCGAGA CCCGTGATGA CAACGTCACC TGGCTCACTC AGGAGGCGTA CGACCGGCTC 
ACTGCCGAGC TGGAGTATTT GTCAGGGCCT GGTCGCATCG AGATCGCCGA CCGGATCGAA 
GCCGCTCGGG AAGAAGGCGA CCTGAGGGAG AACGGCGGCT ACCACGCGGC CAAGGAAGAG 
CAGGGGAAGA TCGAGGCCCG CATCGCCCAC CTGCAGTCGA TCCTGAGCAA CGCGCGCGTC 
GGCCAAGCTC CGCAGCGCGA AGGCGTGGTC GGCCCTGGTA TGACGGTGAC GATCAAGTTC 
GAGGGCGACG AGGAAGAGAT GACCTTCCTC CTCGCCTCCC GGGAAGAGAG CGGGGCACCC 
ATCGACGTGT ACTCCCCTAA ATCCCCGCTG GGGGAGGCCA TCAACGGCAA GAAAGTCGGG 
GAGAAGGTCA CCTACAAGCT TCCGAGCGGT AAGGAAGCGA CCGTAGAAAT CCTCGACGCC 
GTTCCGTACA ACGGCGGCTC ATAA 

 

Protein sequence

MTETRDDNVT WLTQEAYDRL TAELEYLSGP GRIEIADRIE AAREEGDLRE NGGYHAAKEE 
QGKIEARIAH LQSILSNARV GQAPQREGVV GPGMTVTIKF EGDEEEMTFL LASREESGAP 
IDVYSPKSPL GEAINGKKVG EKVTYKLPSG KEATVEILDA VPYNGGS