Gene Tfu_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0415 
Symbol 
ID3579939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp467669 
End bp468637 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content65% 
IMG OID637684102 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_288476 
Protein GI72160819 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00469729 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGGCA TGAAAGCCGC GGGTCAAAAA AAACTCATGC TCTTCTCGGG ACGGACCCAC 
CCCGATCTCG CGGCGGAGGT CGCGGTGGAA CTGGGTATCG AAACGGTTCC CACCAGGTTC
CAGGACTTCG CCAACGGGGA GATCTTCGTC CGCTACCTGG AGTCGGTCCG AGGGTGTGAC
GCTTTCGTCA TCCAGTGCCA CTCCGATCCG ATCAACAAGT CCATCATGGA GCAGTTGATC
ATGGTGGACG CGCTGAAGCG GGCGTCAGCG AAACGCATCA CCGTAGTGAC GCCGTTCTTC
GGCTACGCGC GCCAGGACAA GAAGCACCGG GGGCGGGAGC CGATCTCGGC GCGGTTGATC
ACGGACCTGT TCAAAGCCGC CGGGGCGGAC CGGTTGATGG CGGTGGACCT CCACACCGAC
CAGATCCAGG GCTTCTTCGA CGGCCCGGTC GACCACCTGT TCGCCCTTCC CCTCCTCGCC
GACTATGTGG CGGCCAACGT GGACCTGAGC AACACCACCG TGGTGTCGCC GGACTCGGGG
CGTGTGCGCA CCGCAGACCG GTGGGCCGAC CGGCTGGGTA CGCCGCTGGC GATCGTCCAC
AAGCGGCGCG ACCCGGACGT GGCGCACGAG GTGCGGGTCC ACGAAGTCGT CGGTGAGGTG
CGGGGCCGGA CCTGTGTCCT GGTGGACGAC ATGATCGACA CCGCGGGCAC CATCGTGAAG
GCCGCGGACG CCTTGTTCGA GCAGGGGGCA GCCAAGGTGA TCGCGGTCGC GACGCACGGT
GTGCTGTCGG GGCCCGCCGT GGACCGGCTC AAGGACTCGC GGATTTCCGA GGTCGTCATC
ACCAACTCGC TGCCGGTGTC GAAGGACCGG CAGTTCGACA AGCTGACCCA GCTATCGATC
GCTCCACTGC TGGCTCGGGC GATCAACGAG GTGTTCAGCG ACGGTTCAGT GACGAGCCTG
TTCGAGTGA
 
Protein sequence
MTGMKAAGQK KLMLFSGRTH PDLAAEVAVE LGIETVPTRF QDFANGEIFV RYLESVRGCD 
AFVIQCHSDP INKSIMEQLI MVDALKRASA KRITVVTPFF GYARQDKKHR GREPISARLI
TDLFKAAGAD RLMAVDLHTD QIQGFFDGPV DHLFALPLLA DYVAANVDLS NTTVVSPDSG
RVRTADRWAD RLGTPLAIVH KRRDPDVAHE VRVHEVVGEV RGRTCVLVDD MIDTAGTIVK
AADALFEQGA AKVIAVATHG VLSGPAVDRL KDSRISEVVI TNSLPVSKDR QFDKLTQLSI
APLLARAINE VFSDGSVTSL FE