Gene Tfu_0408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0408 
Symbol 
ID3580007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp459329 
End bp459790 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content71% 
IMG OID637684094 
Productredox-sensitive transcriptional activator SoxR 
Protein accessionYP_288469 
Protein GI72160812 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR01950] redox-sensitive transcriptional activator SoxR 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.381542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCAAC TTCCGGTCCA GCTCACGATC GGCCAGCTCG CAGAGCGCAG CGGGATGTCG 
CACAGCGCAC TGCGGTTCTA TGAAGCAAAA GGGCTGATCC GGGCAGAGCG GACCGCGGGC 
AACCAGCGCC GCTACCACCG CAGCACCCTG CGCCGCCTAG CGTTCATCGC GGCCGCCCAG 
CGCGTGGGGC TGACCCTCGC GCGGATCCAG GAAGCGCTGG CCACACTCCC TGAGGAGCGG 
GCCCCCACCG CCGAGGACTG GGCGCGGCTC TCCCGCATGT GGCGGGACGA ACTGGAGACC 
CGGATTGATG CGCTGCAACG CCTGCGGGAC CGGTTGACTT CGTGCATCGG CTGCGGCTGT 
CTTTCCCTGC GCTCCTGCGC GCTGCGCAAC AACGACGATG CGCTGGCCGC GTGGGGACCG 
GGTGCCCCGC TGCTGCGCCC GGCACGCGAA GGCGGCCTGT AG
 
Protein sequence
MAQLPVQLTI GQLAERSGMS HSALRFYEAK GLIRAERTAG NQRRYHRSTL RRLAFIAAAQ 
RVGLTLARIQ EALATLPEER APTAEDWARL SRMWRDELET RIDALQRLRD RLTSCIGCGC 
LSLRSCALRN NDDALAAWGP GAPLLRPARE GGL