Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0397 |
Symbol | |
ID | 3579996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 442757 |
End bp | 443839 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637684083 |
Product | ATPase |
Protein accession | YP_288458 |
Protein GI | 72160801 |
COG category | [R] General function prediction only |
COG ID | [COG3950] Predicted ATP-binding protein involved in virulence |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTACGTCG CAGAGTTGGC GGTCTCCGGT ATCCGCGGGT TTTACGGCGC ACGCAGCGTC GAGTTGGGGT TCACCCGCCC CGACGGTGCC CACGCGGGCT GGACGGTGCT GGCCGGACCG AATGGGGCGG GGAAGACCAC TCTGCTGCGC GCCCTAGCCC TGGCTTTGGT GGGGCCGTCG GTGGGTCGCG CGCTGATGTC GGATTTCCGC GGCTGGCTGT CGCGGGGGGA AAGCGACGGC TGGGTGCGGG CCCGCCTCGT CCCAGACCCG CAGTGGGACC GGACCCCCCG GGGGCAGGAC GTGCTGCGGG AGCCGTTCGA AGCCGAACTG TATTGGAGCG ACTTCGGCGG GGCGCGGCCC CAGTTCCTCA TCGAACCGGA CCGGACCGTC CTGTTGGAGA ACGGGCCGTG GGCAGAGCAC CCGCACGGGT GGTTCGTGGT CGGCTATGGG CCGTTCCGGC GACTGGGCGG CCAGTGGTCG CGCCCGGGAC GCCCCGTGCC GGTGCCGGGC GCGCTGTCGC GGCTGGCGAA CCTGTTCGGG GAGGACGCGT CACTCGCTGA AGGGCTGCGG TGGCTGACCG GCGTGCACCT GGGCTGGCGG GAAGGCACCC ATATCGTGCC CAGGTTCGTG CTGTCGCTGT TGGACGACGG TCTGCTGCCC AGTGGTTTCC GGATCGCCCG GCTGGACGGG GAAGGCCTGT GGATAGCCCA CGGCGGCGAG GAGTTCCTGC TCGGCGAACT GGGGGACGGC CACCGGTTGA TGGTGGCGCT CGTGGTGGAC CTGGTGCGGC ACGCTTTCGA AATGTACGGG GCGTCAGCGC TTGGCGAGCA GGGCGGCATG CCCGCGGTGG TCTGCCCCGG GGTGGTGCTC ATCGACGAGG TGGAAGCGCA TTTGCACGCG GGCTGGCAGC AGACGATCGG CGGCTGGCTG CGCCAGCACT TTCCCCGCAT CCAGTTCGTG GTGACCACGC ACAGCCCGTA CATCTGCCGG GACGCTGACG AGGGCGGGCT GATCCGCCTG TCCGCAGTGG ACCGCAACGA GCCACCCCAA GTGGTGTCCG CCCCCAAGGA GCTGGCGTCC TGA
|
Protein sequence | MYVAELAVSG IRGFYGARSV ELGFTRPDGA HAGWTVLAGP NGAGKTTLLR ALALALVGPS VGRALMSDFR GWLSRGESDG WVRARLVPDP QWDRTPRGQD VLREPFEAEL YWSDFGGARP QFLIEPDRTV LLENGPWAEH PHGWFVVGYG PFRRLGGQWS RPGRPVPVPG ALSRLANLFG EDASLAEGLR WLTGVHLGWR EGTHIVPRFV LSLLDDGLLP SGFRIARLDG EGLWIAHGGE EFLLGELGDG HRLMVALVVD LVRHAFEMYG ASALGEQGGM PAVVCPGVVL IDEVEAHLHA GWQQTIGGWL RQHFPRIQFV VTTHSPYICR DADEGGLIRL SAVDRNEPPQ VVSAPKELAS
|
| |