| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0353 |
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| Symbol | |
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| ID | 3580026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 396909 |
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| End bp | 398660 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637684037 |
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| Product | trypsin-like serine protease |
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| Protein accession | YP_288414 |
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| Protein GI | 72160757 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.326819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGA TCGACCGCGG TAGCGGTTCT TCCATGGAAG AACCAGAACG CCCTGAGGGA
CCGCTGGCCG ACGCGGACGG CCGGGAGAGC GTCACGGACC ACCAAGACAC CACCGCTGCG
GACACTCCGG AAGACGCCAC GACCGGCTCC GCTGCCCGCT CTGAGACCGG AGCCGCACCC
GACACTGCCC AGGCGGCTTC CGCACCCTCC GCAGCAGCCG CACCCGCTTC GGAGCCTGCC
GCCTCCGCGG CCGAGCAGCG TGACGCTTCC CACGAGGCTC CCGCACCGGG CAGTAGGGAG
ACTCCGCCGC ACCCGGCGCC CCGTCCCGCA CCGTTCGCGC CGCAGTCCCA CGCTCCCCAC
CCCGCATGGG GCCCGCCCGC ACCCGACCAG GCCACGGCCC GGCACGGGGC GCAGGCCTAC
CCCGGGCCGG AGGCGCCCCA GCCGGCCCCC GGCCGTCCCG GGCCTCCGCC TGCGGGCGGC
GTCCCGGCCG GTGCTGCCCA AGGCGCCTGG CAAGAACGGC CCGCTCAGCA CGACCAGCCG
AACTCCCCCA CAGGCGCCTG GGCCGTGCCG CCGTCCCCCG GAGGGTTCTT CCCGCCGACC
GGGGGATTCC CGACACTGCA CGGCTCCTCC CCGTTCGAAG GCGCCCCACC GCCCGGCAAG
CCGCAGCGCA GCGGCCGGGT AGTGCTGATC GCTGCCGTGA CCGCCCTCAT CACCAGTCTG
ATCGTCGGCC CGGCAGCATC CGTCGCCACC GCCTACTTCC TCAGCGAGCA GGTGGCAGCC
AACCCGGCTG CCACCTCGGC GGCCTCGGGG GACGTCACCA AAGTCGCCGC GAAAGCCCTG
CCGAGCGTGG TGTCCATCGC CACCGCCGAA GGCGGCGGCA GCGGGTTCAT CATCAGGGAC
GACGGGCTCA TCGTCACCAA CAACCACGTG GTCTCTGACG CGCAAGAGCT GACCGTGCTG
TTCCACGACG GTTCGCAGGC GTCCGCCACG ATCGTGGGCA CCGACCCGGT CTCCGACCTC
GCCGTCATCC GGGCTCAAGG CGTCTCCGGG CTCACCCCGG CGTCCCTCGG CGACTCCGAC
CAGGTGGAAG TCGGAGCTGA AGTAGTCGCC ATCGGCGCGC CGCTCGGCCT GTCCGGCACG
GTCACCTCGG GCGTGGTCAG CGCGGTGGAA CGCCCCGTCA ACACGGGTGT CAGCGGACAG
CAGGACAGCC CGCTCCTGCC CTCCCCCGAC GAGGAGGAGC CGCAGGCCAC CACGTCGACG
GTGATCGACG CGATCCAGAC CGACGCCCCG ATCAACCCCG GGAACTCGGG GGGACCGCTC
GTGAACATGA ACGGCGAAGT CATCGGGATC AACACGGCGA TCGCGACGAC GAGCGGCAAC
TTCATGTCGC AGTCCGGGTC CATCGGACTC GGCTTCGCCA TCCCGATCAA CCAGGCCAAA
CCCATCATCG AAGAGCTGAT CAACACGGGC AAGGCCACCT ACGCCGCGAT CGAAGCCTCC
GTCACCGTGG CTGAGGACGG TCCCGGGGCG GAACTCGTGG AAGTGAACCG GGGCGGCGCA
GCAGACCAGG CCGGGCTGCG CAAGGGCGAC GTCATCATCC GGATCGAAGA CCGCATGGTG
ACCGACCCCA ACGTGCTCAT CGCCGAGATC CGCTCCCACC GTCCCGGGGA CACCGTCACC
ATCACCTACC AGCGCGGCGG CCAGACCGCG CAGACCACGG TCACGCTGGC CGCCCAGTCG
CTGGACAACT GA
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| Protein sequence | MSAIDRGSGS SMEEPERPEG PLADADGRES VTDHQDTTAA DTPEDATTGS AARSETGAAP
DTAQAASAPS AAAAPASEPA ASAAEQRDAS HEAPAPGSRE TPPHPAPRPA PFAPQSHAPH
PAWGPPAPDQ ATARHGAQAY PGPEAPQPAP GRPGPPPAGG VPAGAAQGAW QERPAQHDQP
NSPTGAWAVP PSPGGFFPPT GGFPTLHGSS PFEGAPPPGK PQRSGRVVLI AAVTALITSL
IVGPAASVAT AYFLSEQVAA NPAATSAASG DVTKVAAKAL PSVVSIATAE GGGSGFIIRD
DGLIVTNNHV VSDAQELTVL FHDGSQASAT IVGTDPVSDL AVIRAQGVSG LTPASLGDSD
QVEVGAEVVA IGAPLGLSGT VTSGVVSAVE RPVNTGVSGQ QDSPLLPSPD EEEPQATTST
VIDAIQTDAP INPGNSGGPL VNMNGEVIGI NTAIATTSGN FMSQSGSIGL GFAIPINQAK
PIIEELINTG KATYAAIEAS VTVAEDGPGA ELVEVNRGGA ADQAGLRKGD VIIRIEDRMV
TDPNVLIAEI RSHRPGDTVT ITYQRGGQTA QTTVTLAAQS LDN
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