Gene Tfu_0341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0341 
Symbol 
ID3580014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp384732 
End bp385688 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content69% 
IMG OID637684025 
Productcitryl-CoA lyase 
Protein accessionYP_288402 
Protein GI72160745 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.5619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCGG TCGCGTCGCG TTCGCGACGG TCGGTGCTCG CGGTCCCGGC ATCCAACCCC 
CGGTTCATTG AGAAGGCCCG CGGGCTTGCG GTAGACGCCT TCTTCCTCGA CCTGGAGGAC
GCGGTCGCGC CATCGGAGAA AGAGAGAGCC CGGGAGGCCG CGGTCGCCGC GCTCAACGAG
GGCGGCTGGG ACGGCAAAGT GCGCACCGTC CGCATCAACG ACGCCACCAC GGCCTGGGCC
TACCGCGACG TCATCACCGT GGTGGAAGGC GCCGGAGCCG CACTGGACTG CCTGGTGCTG
CCTAAAGTCA CCGGTCCCGC CCCCATCCTG TGGCTGGACA CGCTGCTCAC TCAGATCGAA
CGCGCAGTCG GCCTGGAAGT GGGGCGGATC GGGATCGAAG CGCAGATCGA AGACGCGCGC
GGACTGACCC GGATCAACGA GATCGCTGCC GCCTCACCCC GCGTGGAAAC CCTCGTCTAC
GGCCCCGCCG ACTTCATGGC CAGCATCAAC ATGAAGACGT TGACGGTGGG GGAGCAGCCC
CCCGGCTACG ACGTCGGCGA CGCCTACCAC TATGTGCTTA TGCGCATCCT CACTGCCGCC
CGCGCCCACG ACCTGCAGGC GATCGACGGC CCCTACCTGA AGATCCGCGA CGTGGACGGC
TTCACCCGCG CCGCGCGGCG CACCGCGGCC CTCGGCTTCG ACGGCAAATG GGTGCTGCAC
CCCGGCCAGG TGGACGCGGC CAACGAGGTC TACGCCCCCA CCCAGGAGGA CTACGACCAC
GCGGAACTCG TCCTGGACGC CTACGACTAC GCCACCAGGG TGCAGCGGCG CGGCGCGGTC
ATGCTCGGCG ACGAGATGCT CGACGAAGCG TCCCGCAAGA TGGCGCTGGT CATCGCGGCC
AAGGGACGCG CGGCCGGTAT GAAACGGACC AAGACGTTCG TGCCCGACAC CGAGTAG
 
Protein sequence
MNAVASRSRR SVLAVPASNP RFIEKARGLA VDAFFLDLED AVAPSEKERA REAAVAALNE 
GGWDGKVRTV RINDATTAWA YRDVITVVEG AGAALDCLVL PKVTGPAPIL WLDTLLTQIE
RAVGLEVGRI GIEAQIEDAR GLTRINEIAA ASPRVETLVY GPADFMASIN MKTLTVGEQP
PGYDVGDAYH YVLMRILTAA RAHDLQAIDG PYLKIRDVDG FTRAARRTAA LGFDGKWVLH
PGQVDAANEV YAPTQEDYDH AELVLDAYDY ATRVQRRGAV MLGDEMLDEA SRKMALVIAA
KGRAAGMKRT KTFVPDTE