Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0336 |
Symbol | |
ID | 3579817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 377892 |
End bp | 378713 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637684020 |
Product | ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components |
Protein accession | YP_288397 |
Protein GI | 72160740 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.677226 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCCAGC CCACTTCCTC CCGGTTGCGG GGAGAGAACC TGACCCTGGC CTACGACCAG CGCGTCATCT CCCGGAACCT CGAAGTGGCG ATCCCCGACC ACTCGTTCAC CGTGATCGTC GGCCCTAACG CGTGCGGCAA GTCCACTCTG CTGCGCGCCC TGTCGCGGAT GATCCGTCCG ACGACGGGCG CGGTGTACTT GGACGGCAAG CTCATCCACT CGTATTCGTC GAAAGAGGTG GCACGGCGGC TGGGACTGCT GCCGCAGACG TCGATCGCGC CGGACGGGAT CACCGTGGTC GACCTGGTCT CCCGGGGCCG CTACCCGCAC CAGCGGTTTT TGCGGCAGTG GTCGCGGGAG GACGAACGGG TGGTCGCCGA GGCGATGGCG GCGACCCGGG TCTCCGACCT CGCCGACCGG CTCGTAGACG AGCTGTCCGG GGGCCAGCGG CAGCGCGTGT GGTTGGCGAT GGTGCTGGCG CAACAGACCC CGCTGCTGCT GTTGGATGAG CCGACCACCT TCTTGGACAT CGCCCACCAG CTGGACATGC TGGACCTCTG CGCTGAGCTA CACCAGGAGC GCGGGCACAC GCTGGTGGCG GTGCTGCACG ACCTGAACCA GGCCTGCCGG TACGCCACCC ATCTGATCGC GATGAAGGAC GGCGCAGTGG TCGCCCAAGG GGACCCGCAG GAGATCGTCA CCGCGGAGCT GGTGGCGGAG GTCTTCGGGC TGCCGTGCCA GATCATCCCC GACCCGGAGA CCGGAACCCC CATGGTGGTG CCGAGCGACC GGCGGAAGCG GGCCGGGCGG AAGGCTGCGT GA
|
Protein sequence | MSQPTSSRLR GENLTLAYDQ RVISRNLEVA IPDHSFTVIV GPNACGKSTL LRALSRMIRP TTGAVYLDGK LIHSYSSKEV ARRLGLLPQT SIAPDGITVV DLVSRGRYPH QRFLRQWSRE DERVVAEAMA ATRVSDLADR LVDELSGGQR QRVWLAMVLA QQTPLLLLDE PTTFLDIAHQ LDMLDLCAEL HQERGHTLVA VLHDLNQACR YATHLIAMKD GAVVAQGDPQ EIVTAELVAE VFGLPCQIIP DPETGTPMVV PSDRRKRAGR KAA
|
| |