| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0329 |
|---|
| Symbol | |
|---|
| ID | 3579810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 370304 |
|---|
| End bp | 371611 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637684013 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_288390 |
|---|
| Protein GI | 72160733 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.982298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACA GCCGAGTGGG GGTGTGGCGG GAACGCCTGG TCGCCGTGCT TTCCCTGTTG
ACCTCGTTCG CGCTGGCTCC CGTCTCCCTT GTGCCGGCCG CGCTGCTGGC GGTCATGGTG
GGCGCCTTGT CGTCCACGAC CGTCGAGGTG GTGCGCGGCA CGACTCCTGC GGACTGGCGT
CTGCTGCTCC TCTCCGCCGC CACCCTGGGG TCGGTCCCCG TGGCCACGCT CCTGGCCCGG
CTGGGAGTGC ACATCCACAA ACGGCGGGCG GGGGCCCTGT TCGGCATCGT GGAGACCACG
GTTCCCGCGG GAGACGGGAC GCTCCGACTG CTCCGCGGCA TCGGGTTCGT GGTCGGCCGG
GACGCCTGGG CCGCGGTGGG GCACACCACG GTGATCGGAC TCGCCGGGCT GCTGTTCGGC
GGGCTTGCCG TGCTGTTGAT CGCCTATGGG GCGGGCGGGG TGATCGGTGG GATCGGCGCG
CTCGCCGCCA CTCTCCTCAC GAGCGGATCG GTGCAGGTCA CCGGTATGGC CTTGGTGGTG
GCGGTGCTCG TGGCGGGGCC TCCCCTGGTG GTGGCCGGAC TGTGGGTTGC GCCCTGGCTG
GTGCGGCTCG ACCTCGCCGT GATGCGACGG ACCCTGTTCG ACTCTCCCCA GGTGCGTGTC
CGCCGTCGGT TGTGGGAGCT GAGCGACACC CGTTCCCGCA TGGTGGACGC GGCCGAAGCG
GAACGCCGCC GGATCGAACG GGACTTGCAC GACGGTGCGC AGCAGCGGCT GCTGTCCCTC
ACGCTGACCT TGGCACGGGC GCGCGCCAAA TTCGACCGCG ACCCGGAGCA GGCTCGGGAA
CTGGTGGAGG AAGCCCAGCG CGAAGCCCGG GCAGTGATGG CGGAACTGCG GGAGGTGGCC
CGCGGGCTAC ACCCGAAGGT CCTCACCGAC CATGGGCTTG ACGCCGCGCT CCCTGTGGCT
GCCGGACGGT GCCCGGTGCC GGTCCGTCTC GAAGTGCACC TCGACGAACG ACCGTCGCCA
CGGGCTGAAG GCGTCGCCTA CTACGTGGTC TGCGAGGCGC TCACCAACGT GGCCAAGCAT
GCGCAGGCGT CCGCGGTCAC GGTCCGGGCC GAACGGATTC GGCGCCGCCG GGACGACCTG
CTCCGCATCA CCGTCATCGA CAACGGCCGC GGAGGCGCCG ACCCGCAGTC CGGCACCGGG
CTGCACGGAC TGTCCGACCG GGTCGAGGCG GTCGACGGTG AACTGTTCAT CCACAGTCCG
CCCGGTGAGG GCACGGTCCT CACCGCTGAC ATTCCGTGGA GGGCGTAA
|
|---|
| Protein sequence | MADSRVGVWR ERLVAVLSLL TSFALAPVSL VPAALLAVMV GALSSTTVEV VRGTTPADWR
LLLLSAATLG SVPVATLLAR LGVHIHKRRA GALFGIVETT VPAGDGTLRL LRGIGFVVGR
DAWAAVGHTT VIGLAGLLFG GLAVLLIAYG AGGVIGGIGA LAATLLTSGS VQVTGMALVV
AVLVAGPPLV VAGLWVAPWL VRLDLAVMRR TLFDSPQVRV RRRLWELSDT RSRMVDAAEA
ERRRIERDLH DGAQQRLLSL TLTLARARAK FDRDPEQARE LVEEAQREAR AVMAELREVA
RGLHPKVLTD HGLDAALPVA AGRCPVPVRL EVHLDERPSP RAEGVAYYVV CEALTNVAKH
AQASAVTVRA ERIRRRRDDL LRITVIDNGR GGADPQSGTG LHGLSDRVEA VDGELFIHSP
PGEGTVLTAD IPWRA
|
|---|
| |