| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0319 |
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| Symbol | cobN |
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| ID | 3579992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 358269 |
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| End bp | 361898 |
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| Gene Length | 3630 bp |
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| Protein Length | 1209 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637684003 |
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| Product | cobaltochelatase subunit CobN |
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| Protein accession | YP_288380 |
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| Protein GI | 72160723 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
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| TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCGCA TAGCACTGCT TTCCACCTCG GACACCGACC TGCTGTCGGC ACGTGCCAGC
GGCGCAAACT ACGTCTGGGG CAACCCGTCG CGTCTCGACG TCACCGGAAC AGATCCCGGT
TCGCTCCACG CCCTGCTTCA CGGCGCTGAC CTGGTAATTG TGCGCATTCT GGGGTCTGCG
CGCTCGTGGC AGGAGGGCCT CGACCAGGTT TTAACCCATG GCGTCCCCGT TGTGGTGCTG
GGCGGAGAGC AGACCCCGGA CGCGGAGCTG ATGAGCCATT CCACCGTACC CGTCGGGATC
GCTGCTGAAG CCCACCGCTA TCTGGCCCAC GGGGGGCCCG ACAACCTCGC TGCGCTGCAT
GCCTTCCTCA GCAGCACCGT GCTGCTGACC GGTGGGAGTT TTGATCCGCC GACAGAACTG
CCCGAATGGG GCCTGCTTGA GCGGTCCACG CCACCACAGG CGGACCGGGA CGGGCTGCCG
AGGATTGGCA TCCTCTACTA CCGCGCCCAC CAGGCCAGCG GGAATACTCG TTTCGTCCAC
GACCTGGCTG ACGCGGTCGA CGCTACCGGC GAAGCGGTCG CCGTCCCCAT CTACTGCACG
TCGCTGCGCA GCGCATCCCC GGAACTCCTC GCGGAGCTCG GCACCCTGGA TGCGCTGGTC
GTCACCGTGC TCGCCGCGGG AGGAACCCGC CCGGCCACAG CCAGTGCTGG AGGCGACGAC
GAGGCGTGGG ACGTTGGTGA ACTAGCGCGA CTCGACATTC CGATCCTGCA GGCGCTCTGC
CTGACGTGGG GGCGTGATCA GTGGAAGGCT TCCGACGAGG GGACGTCCCC CCTCGACTCT
GCATCCCAGA TCGCCGTCCC CGAATTCGAC GGGCGCATCA TCACCGTGCC GTTCTCCTTC
AAGGAGTTCG ACGACGAAGG ACTGCCCCAC TACGTCACCG ATGCGGAACG GTGCCGCCGA
GTAGCCGACA TCGCCGTCGC TCATGCCCGG CTGCGGCACA TCCCACCCGC CCAGCGCCGG
GTCGCGATCG TGCTGTCGGC CTACCCCACC AAGCATTCCC GAGTCGGCAA CGCCGTGGGC
CTGGACACCC CCGTCTCCGC GGTGCGGTTG CTGCGGGCCA TGCGGGACGC CGGATACGAC
CTGGGAGACG GGTTTCCCGG TGTGGACCTG GCGGACGAGA CCGAAGCGGG TAACACCCTC
ATCCACGCCC TCATCGAAGC CGGTGGACAG GACGAGGAGT GGCTGACCGC CGAACAGTTA
GCGGGAAATC CGGTGCGCAT CCCGGCCGAA CGCTACCGGG AGTGGATCGC CGACCTGCCC
GGTGAACTGA TTGACGCGGT GAACGAGCAC TGGGGAGAGC CGCCCGGCAC GCTTTTCGTC
GACAACGGCG ACATCGTGCT CGCTACCCTC CAGGCAGGCA ACGTGGTGCT CATGATCCAG
CCGCCGCGTG GTTTCGGAGA GAACCCGGTG GCGATCTACC ACGACCCCGA CCTGCCGCCG
TCCCACCACT ACCTCGCCGC ATACCGGTGG CTGGAATGCG GCTTCGGCGC CCACGCCATC
GTCCACCTCG GCAAACACGG CTCCCTGGAG TGGCTGCCCG GCAAGAACGC CGCACTGTCC
GCGGCGTGCG CCACCGATGC CGCACTCGGC GCGGTGCCGC TCATCTACCC CTTCCTCGTC
AACGACCCGG GTGAAGGGGC GCAGGCTAAG CGGCGGGCCC ACGCGACGAT CATCGACCAT
CTTGTGCCCC CGATGGCACG CGCCGAGTCT TACGGCGACA TCGCCCGGCT GGAGCAGCTC
CTCGACGAGC ACGCCAACAT CGCCGCGATG GATCCGGCGA AGCTTCCCGC GATCCGGGCG
CAGATCTGGA CTCTCATCCA GGCCGCCAAA CTCGACCGTG ACCTGGGGCT GTCCGAGCGG
CCGCATGACG CGGAATTCGA CGACTTCCTG CTGCACGTCG ACGGCTGGCT GTGCGAAGTC
AAAGACTCTC AAATCCGCGA CGGACTGCAC GTGCTAGGTG GGGCGCCTGT CGGCGAGGCC
CGCGTCAACC TGGTGCTGGC CATCCTGCGT GCTGTCCAAG TGTGGGGTGG GCAGGCCGGT
GCTGTGCCTG GACTGCGCCG TGCTCTCGGC CTGGCGGGAG ACACCGGAAA CCGGGCGGAG
GTTGACGCCG TCGAAGCCCG GGCCCGCGCC CTGGTCGAGG CCATGGAGGA AGCCGGCTGG
GATCCGGAAC AGGCACAGGT CGTGGCGGAC CGGCTCGGCG AGACCGCTCC GGACGTGGTC
CGGGTGCTCC GGTTTGCGGC CGAGCACGTC ATTCCACGGC TCGCAGACAC CCGTCAAGAA
ATCACCGCGG TACTCCATGC CCTCAACGGC GGCTTCGTTC CCGCCGGACC GTCGGGATCG
CCGCTGCGTG GCCTGGTTAA CGTACTGCCC ACCGGCCGCA ACTTTTACAC CGTCGACCCC
CGGGCCATCC CGAGCCAGCT CGCCTACGAG ACCGGGAAAG CATTGGCTGA CGCGCTTATT
GAACGCTACC GCGCCGAAAC CGGCGAGTAT CCGCGTTCGG TGGGGCTATC AGTATGGGGA
ACCTCAGCTA TGCGTACCTC TGGAGACGAC ATCGCTGAGG TGCTCGCTCT CCTCGGGGTG
CGCCCCGAAT GGGACGAGGT GTCCCGCCGG GTGCGGGAGC TGAGCGTCAT CCCGCTGCCC
GAGTTGGGAC GCCCACGCAT CGACGTCACC GTCCGCATCT CCGGGTTCTT CCGAGACGCC
TTCCCTCACG CGGTCGCCAT GCTCGACGAC GCCGTCCGCA TGGTGGCGGA ACTCGACGAA
CCGGACGACG CTAACTACGT GCGGGCTCAC GTCCGCAGCG ACCTCGCGGA ACACGGTGAC
CGTGAACGCG CGCTGCGGCG CATCTTCGGT TCCGCCCCCG GTGCCTACGG GGCAGGCCTG
CTCCAGCTGA TCGACTCTGG TGACTGGCGT AGCGACGCTG ATCTCGCCGA GGTCTACACC
GCGTGGGGCG GTTTCGCCTA CGGGCGCAAC CTGCACGGTG AGCCTTCTGC GGAAGACATG
CGTGCCAACT ATCGGAGGAT CGCGGTAGCC GCGAAGAATA CGGACACCCG CGAGCACGAC
ATCGCCGACT CGGACGACTA CTTCCAATAC CACGGCGGCA TGGTCGCCAC CGTGCGCGCC
CTCACCGGCG TCGAGCCGAA GGCCTACATC GGCGATTCCA CCACACCGGA CCAGGTGCGC
ACCCGGTCGC TGCGGGAAGA GACCGCCCGG GTTTTCCGTG CCCGAGTGGT TAACCCCCGG
TGGCTGGCGG CGATGCGGAA CCACGGTTAT AAGGGCGCAT TTGAACTGGC CGCCACTGTC
GACTACCTGT TCGGCTACGA CGCGACCGCG GGGGTGGTCG ACGACTGGAT GTATGAGACC
CTCGCCCAGA CCTATGTCCT GGACACCGAG AATCAGGAGT TCCTCCGGCA AGCGAACCCC
TGGGCGCTCC AGGGCATTGT GGAGCGGCTC ACCGAGGCTG CTGATCGTGG CCTGTGGCGG
GAGCCCCACC CACAGACAAT GGAGGCGCTG CGCCGCGTCT ACCTGGAAGT CGAGGGAGAA
CTGGAGGACC GGGGGACGAA TCGGACGTGA
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| Protein sequence | MPRIALLSTS DTDLLSARAS GANYVWGNPS RLDVTGTDPG SLHALLHGAD LVIVRILGSA
RSWQEGLDQV LTHGVPVVVL GGEQTPDAEL MSHSTVPVGI AAEAHRYLAH GGPDNLAALH
AFLSSTVLLT GGSFDPPTEL PEWGLLERST PPQADRDGLP RIGILYYRAH QASGNTRFVH
DLADAVDATG EAVAVPIYCT SLRSASPELL AELGTLDALV VTVLAAGGTR PATASAGGDD
EAWDVGELAR LDIPILQALC LTWGRDQWKA SDEGTSPLDS ASQIAVPEFD GRIITVPFSF
KEFDDEGLPH YVTDAERCRR VADIAVAHAR LRHIPPAQRR VAIVLSAYPT KHSRVGNAVG
LDTPVSAVRL LRAMRDAGYD LGDGFPGVDL ADETEAGNTL IHALIEAGGQ DEEWLTAEQL
AGNPVRIPAE RYREWIADLP GELIDAVNEH WGEPPGTLFV DNGDIVLATL QAGNVVLMIQ
PPRGFGENPV AIYHDPDLPP SHHYLAAYRW LECGFGAHAI VHLGKHGSLE WLPGKNAALS
AACATDAALG AVPLIYPFLV NDPGEGAQAK RRAHATIIDH LVPPMARAES YGDIARLEQL
LDEHANIAAM DPAKLPAIRA QIWTLIQAAK LDRDLGLSER PHDAEFDDFL LHVDGWLCEV
KDSQIRDGLH VLGGAPVGEA RVNLVLAILR AVQVWGGQAG AVPGLRRALG LAGDTGNRAE
VDAVEARARA LVEAMEEAGW DPEQAQVVAD RLGETAPDVV RVLRFAAEHV IPRLADTRQE
ITAVLHALNG GFVPAGPSGS PLRGLVNVLP TGRNFYTVDP RAIPSQLAYE TGKALADALI
ERYRAETGEY PRSVGLSVWG TSAMRTSGDD IAEVLALLGV RPEWDEVSRR VRELSVIPLP
ELGRPRIDVT VRISGFFRDA FPHAVAMLDD AVRMVAELDE PDDANYVRAH VRSDLAEHGD
RERALRRIFG SAPGAYGAGL LQLIDSGDWR SDADLAEVYT AWGGFAYGRN LHGEPSAEDM
RANYRRIAVA AKNTDTREHD IADSDDYFQY HGGMVATVRA LTGVEPKAYI GDSTTPDQVR
TRSLREETAR VFRARVVNPR WLAAMRNHGY KGAFELAATV DYLFGYDATA GVVDDWMYET
LAQTYVLDTE NQEFLRQANP WALQGIVERL TEAADRGLWR EPHPQTMEAL RRVYLEVEGE
LEDRGTNRT
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