Gene Tfu_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0289 
Symbol 
ID3578886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp326570 
End bp327841 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content69% 
IMG OID637683973 
Productputative two-component system sensor kinase 
Protein accessionYP_288350 
Protein GI72160693 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.159302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACGAT CGCCCTCCCA CTGGTCCGAC ATACCTCAAG CCGACGAACG CAGCATGCGA 
CGGCTGCGGA TCACCCGCTG GTTCGTGCTC ATCTGCGTAG CCTTGTACGC CGTCTTCATC
CTGGTGATGG CGCTGGTCCA GGTGGAGCTG GCGTTCACTT CCCCGGAGGA GGTGCAGTGG
GGGCCGCTCT CCTGGTCCGG GATGACGCTG CCCTGGTATG CGGCGCTCCT CCTCGTGCTG
GCCGGGGCCG TGGCCGTGCT CACCGTTCTT CTTGTCCGCT GCCGGATCAA CGGGCGGCGC
TCCTGTCCCC CTGCGCTGCT CTACTGGTCG CTCGGAGTGC TCCTCGCCCT GGTCTCGGTC
ATGGACGTGA CCGTGTTCTC CGTTGCGATC GTGGCCACGT GGTGGTCGGC AGCGATCCTC
GTCATCCCGC GCCGCACCGC AGTCCTCTTG TCCACGGCCG TCGTCGGCTT CCTCATCAGC
TACACCCTGG TCCTGTCCTC GCAGCCGTCC GTGGTCGCGC TGGCGTTCAT CATCCTCAAC
CTTCCGATGG CGCTGCTCAA CGCGGCAGGG AGCTTCTCGG TGGTGTGGCT GTGGGAAGTC
GCCCGCGAAG CCACCCTGGC GCGGGAGGCG CGGGCCCGGC TCGCGGTCAG TGAGGAACGG
CTGCGGTTCG CCCGGGACAT GCACGACCTT CTCGGCCACA GCCTGTCCGG TATTGCAGTG
AAAAGCGAGC TCGCCGCCCG GCTTGCCCGG AGCGACCCGG AGCGCGCCGC GGCAGAAATG
GCCGAAGTGC AGCGGATCGC CCGGGAAGCA CTGCGCGAGG TGCGGGCCGC CGTCAGCGGA
TACCGCGCCG TGAACCTGGC CGACGAACTG GCGAGCGTGC GCTCCGTGCT GCTGGCTGCG
GGGGTCTCCG CCACGGTCAC GGGCAACCCC GCGGACATCC CAGCGCAGTC CCAGTCCTTG
ATCGCGTGGC TTGTCCGGGA GGGGGCGACG AACGTGCTGC GGCACAGCAG CGCACAGCGC
TGCGACATCA CGCTCTCCCG CCAAGACCGC ACCTGGGTGG TGGAGGTGTA CAACGACGGG
GTGCGCGCCG GGAAAGCCAC CAGGTTCGGC AACGGGCTGA CCGGCCTGTC GGAGCGGGTG
GCCTCCGCCG GCGGCACTCT CACCGCGAGC CACACCTGCA ACGGCGGCTT CCTGCTGCGC
GCGGTCCTGC CCGTCCCCGC CTCCGTCGAG GAGCCGGTCA GGGAAACCCA GGAGAAGAAA
GCTGTCGCAT GA
 
Protein sequence
MPRSPSHWSD IPQADERSMR RLRITRWFVL ICVALYAVFI LVMALVQVEL AFTSPEEVQW 
GPLSWSGMTL PWYAALLLVL AGAVAVLTVL LVRCRINGRR SCPPALLYWS LGVLLALVSV
MDVTVFSVAI VATWWSAAIL VIPRRTAVLL STAVVGFLIS YTLVLSSQPS VVALAFIILN
LPMALLNAAG SFSVVWLWEV AREATLAREA RARLAVSEER LRFARDMHDL LGHSLSGIAV
KSELAARLAR SDPERAAAEM AEVQRIAREA LREVRAAVSG YRAVNLADEL ASVRSVLLAA
GVSATVTGNP ADIPAQSQSL IAWLVREGAT NVLRHSSAQR CDITLSRQDR TWVVEVYNDG
VRAGKATRFG NGLTGLSERV ASAGGTLTAS HTCNGGFLLR AVLPVPASVE EPVRETQEKK
AVA