| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0184 |
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| Symbol | |
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| ID | 3579762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 207217 |
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| End bp | 209025 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637683867 |
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| Product | BCCT transporter |
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| Protein accession | YP_288245 |
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| Protein GI | 72160588 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCACCGTG CTTGTAGAGG GGGTGGCGCG ACTCCGCGCC AAGACGTCGT GGTACGACCA
ACTCACGGAT CATCCGATAC GACCACCAAC TCGGCCGACA ACCAAGACCT GCTGTGGGAA
CCGCCTCCCG TCCTCGAAGC GGAGCGGCCG CCGCGGACGG ACTGGGCAGT GTTCCTCACC
GCAGCAGCGT TCACCCTGGC CTTCGTCGCG TGGGGGGCGA TCTCTGACGA GACGCTGGCC
CAGGTCGCCG AGAACCTGCT GGCCGGGTTG ATGCGCTACG GCGGCTGGGC GTTTGTGCTG
GTCGCCGGAG TGTTCGTGGT GTTCGCGCTG TGGCTGGCCT TCAGCAAGTA CGGGCAGATC
CCCCTCGGCC GGGAGGGGGA GGAGCCCCAG TACACGACGG TGTCGTGGGT CGCCATGATG
TTCGCCACCG GTATGGGGAT CGGGCTGGTG TTCTACGGGG TGGCAGAACC CTTGGCCCAC
TACGTCACTC CCCCACCGGG CACGGATGCC GCGAGTGAAT CGCAGCGGAC TCTCACCGCG
ATCGCCACCA CCTTGTTCCA CTGGACCCTG TATCCGTGGG GCATCTACGC GGTGGTCGGC
TTAGCGATCG CATACACCAC CTTCCGCCGG GGGCACAGCC AGCTCATCAG CGCCGCGTTC
ATCCCGCTGT TCGGGGAGAG GGCCGCAAAA GGGCCGCTCG GCAAGGCGGT CGACGTGATC
GCGATCCTGG CCACCCTGTT CGGGTCTGCC TGCTCGCTGG GGCTGGGGGC GCTGCAGATC
GCGGGAGGGT TCCAGACCCT GGGGTGGACG AGCCAGACGA CGTTCGGCCT GCTGTTTCTG
ATCATCGCGG CCATCATGGC CTGCTACCTG GTCTCCGCGG TCTCCGGAAT CGCGCGGGGG
ATCAAGTGGC TGTCCAACAC CAACATGGTG ATGGCCGTGC TGCTGCTCGT CTTCGTGCTG
GTCACCGGGC CGACCGTGTA CATCCTGGAC CTCGTGCCGG GCGCGGTGGC CACGTTCTTC
CAGGACTTTT TTGAGATGGC GGGACGCACT CAGGCGGTCG GCGGCAACAC CGCGGAGTGG
CTGTCAACAT GGACCGTGTT CTACTGGGCC TGGTGGATCT CGTGGACCCC GTTCGTGGGG
CTGTTCATCG CCAAGATCAG CCGCGGCCGC ACGATCAGGG AGTTCGTGGC CGGTGTCATC
GTGGTGCCGA GCGTGGTCAG CCTGATCTGG TTCGTCATCT TCGGGTGCAC GGCGATCCAT
TTCCAGCAGT CGGGGGTTGA TCTAGCCGCG TCCAACCAGA TCGAGGCGCA GTTCTACGGG
ATGCTGCAGA ACCTGCCGTG GAGCGGCGTG GTGAACGTGG TGCTCGCCGT GCTGGTCGCG
ATCTTCTTCA TCACCGGCGC GGACTCGGCA TCCATTGTCA TGGGCACGCT CACCCAAGGC
GGAGTGGACA AGCCGCGGCT GGCCATGACC GTGCTGTGGG GGATGCTCAT CGCGGCGGTG
GCCGCGATCA TGCTGCTCGT CGGCGAGGGC GGCAGCACCG CGATCGACGG GCTGCAGAAC
ATCACCATCC TCGGGGCTGC TCCGTGGGCG ATCGTCATGC TCCTGCTGTG TGTGGCCTTG
CTGAAAGGGC TGCGGCGGGA TCCTCTGGCG GTGCGGGAGC GCAAAGCCAG GGAGCTCATG
GACGAGGCGG TCATCACCGG GGCCCGCACC TACGGGGAGA GCGGGTTCCA GTTCCCGGTG
GCGCCGGCGC GGCGGGAGGA GGCGCCACCG CCGCCGCGGA AGGGTGACGG GGACGCCTCC
GAAACGTAG
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| Protein sequence | MHRACRGGGA TPRQDVVVRP THGSSDTTTN SADNQDLLWE PPPVLEAERP PRTDWAVFLT
AAAFTLAFVA WGAISDETLA QVAENLLAGL MRYGGWAFVL VAGVFVVFAL WLAFSKYGQI
PLGREGEEPQ YTTVSWVAMM FATGMGIGLV FYGVAEPLAH YVTPPPGTDA ASESQRTLTA
IATTLFHWTL YPWGIYAVVG LAIAYTTFRR GHSQLISAAF IPLFGERAAK GPLGKAVDVI
AILATLFGSA CSLGLGALQI AGGFQTLGWT SQTTFGLLFL IIAAIMACYL VSAVSGIARG
IKWLSNTNMV MAVLLLVFVL VTGPTVYILD LVPGAVATFF QDFFEMAGRT QAVGGNTAEW
LSTWTVFYWA WWISWTPFVG LFIAKISRGR TIREFVAGVI VVPSVVSLIW FVIFGCTAIH
FQQSGVDLAA SNQIEAQFYG MLQNLPWSGV VNVVLAVLVA IFFITGADSA SIVMGTLTQG
GVDKPRLAMT VLWGMLIAAV AAIMLLVGEG GSTAIDGLQN ITILGAAPWA IVMLLLCVAL
LKGLRRDPLA VRERKARELM DEAVITGART YGESGFQFPV APARREEAPP PPRKGDGDAS
ET
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