| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0179 |
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| Symbol | |
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| ID | 3579757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 201549 |
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| End bp | 202148 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637683862 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_288240 |
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| Protein GI | 72160583 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02947] RNA polymerase sigma-70 factor, TIGR02947 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGCGACCA TTGAACTCGA CCGTCCCGCA GAGACCACCG TCACTGCGGA GGGTCTCGAC
TTTGCAGAGG CAGTCAGGCC GTACGCCGAC CAGCTCTACC CGGCAGCCCT GCGGATGACG
AGGAATTCGG CGGATGCCGA AGACTTGGTT CAAGAGACCT TCACCAAGGC GTTCGCTAAC
TTCCACCAGT TCCGTGCGGG CACGAACCTG CGCGCCTGGC TCTACCGGAT TCTCACCAAC
ACCTTCATCA ACGGCTACCG CAAGAAGCAG CGGGAGCCGC GCCAGGAAGT CACCGACGAG
ATCAAGGACT GGCAGTTGGC GGCGGCCGAC GCGCACTCGT CCACCGGGTC GCGGTCGGCG
GAGGCCGAAG TCCTCGACCG GCTGCCGGAT TCCGCGATAC GCACCGCGCT CGCCCAGCTG
CCGGAAGAGT TCCGCATGGT CATCTACCTG ATCGATGTCG AGGGCTTCTC CTACAAGGAA
GTGGCGGAGC AGATGGACAC CCCGTTGGGA ACGGTGATGT CGCGGCTGCA CCGGGCACGC
CGGCAGCTTC GCGTGCTGCT CGCGGACTAC GCCAAGGAGC GTGGCCTGTA CGCGGACTGA
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| Protein sequence | MATIELDRPA ETTVTAEGLD FAEAVRPYAD QLYPAALRMT RNSADAEDLV QETFTKAFAN
FHQFRAGTNL RAWLYRILTN TFINGYRKKQ REPRQEVTDE IKDWQLAAAD AHSSTGSRSA
EAEVLDRLPD SAIRTALAQL PEEFRMVIYL IDVEGFSYKE VAEQMDTPLG TVMSRLHRAR
RQLRVLLADY AKERGLYAD
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