Gene Tfu_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0172 
Symbol 
ID3579750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp196770 
End bp197234 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content63% 
IMG OID637683855 
Productthioredoxin 
Protein accessionYP_288233 
Protein GI72160576 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGAA TGCGGAACAA AGCAGCGGCC TCAACCGCTG TACAAGGGAG AAGACCGTTG 
CTGACGCCAC GATCAGGAGA GCCTGTGGCC ACTATCGAAC TGACCAAGGA CAACTTCAAT
CAGACGCTCG AAGAGAACGA CTTCGTCCTC ATCGACTTTT GGGCCTCCTG GTGCGGGCCG
TGCAAGATGT TCGCTCCGAT CTTTGAGCGG GCGTCAGAAC GGCACAAGGA CCTGGTGTTC
GCCAAGGTCG ACACCGAGGC CCAGCAGGAG CTGGCCGCGA GCTTCAACAT CCAGTCGATT
CCGACGCTCA TGATCGTGCG GGATCGGACT GTGCTCTACG CCCAGCCGGG CGCGCTGCCG
GAAGCGGCCC TGGAGGACCT GATCCAGCAG GCCCGCGACC TCGACATGGA CGAAGTGCGC
CGGCAGATCG CCGAGCAGCA GGGCAACGGC CAAGCGTCGG AGTAG
 
Protein sequence
MPRMRNKAAA STAVQGRRPL LTPRSGEPVA TIELTKDNFN QTLEENDFVL IDFWASWCGP 
CKMFAPIFER ASERHKDLVF AKVDTEAQQE LAASFNIQSI PTLMIVRDRT VLYAQPGALP
EAALEDLIQQ ARDLDMDEVR RQIAEQQGNG QASE