Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0118 |
Symbol | |
ID | 3579735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 141677 |
End bp | 142453 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637683801 |
Product | endonuclease III / DNA-(apurinic or apyrimidinic site) lyase |
Protein accession | YP_288179 |
Protein GI | 72160522 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCCGCA ACGTATACAC TGCTTCCTCC TCCCCCGGTG CTAGCGGCGA CGCGTCCGCA GCGGAGCGCG ACACGCCCAC GGGTGAGACT CGCCTCGCTT TGATGAGACG TTCCCGACAA ATCAACCGGG AATTGGCGCG AATGTATCCC GACGCGCACT GTGAGCTTGA TTTCACTACC CCCCTCGAAC TCCTGGTAGC CACCATCCTG TCGGCCCAGT GCACGGACCG GAGGGTCAAC AAGGTGACCC CCGTGTTGTT CGCCCGCTAC CGCTCTGCAG CCGACTATGC TTCGGCCAAC CAGGAGGAGC TCGAAAACAT CATCCGCTCC ACTGGCTTCT ACCGCACCAA GGCGCGCAAC ATCATCGCGC TTGGCCAGCG GTTGTGCGAC GAACACGGCG GAGAAGTTCC CGACCGGTTG GAAGACTTGG TGAAACTGCC GGGTGTGGGC CGCAAGACCG CCAACGTGGT GCTGGGCAAC GCCTTCGGTG TTCCCGGCCT CACCGTCGAC ACCCACTTCG GACGGCTTGT GCGCCGCTTC GGGATGACCC GGCAGACCGA CCCGGTGAAA GTGGAACAGG AGATCGCTGC CCTGTTCCCG CCCGAGGAGT GGACGATGCT ATCCCACCGG CTCATCTGGC ACGGGCGCCG AGTCTGCCAT GCCCGCCGCC CCGCGTGCGG TGCCTGCGAA CTCCAGCACC TGTGCCCCTC CTACGGTGAA GGACCGGTGG ACGAGGAGAC CGCGCGGCGG CTGGTACGGA CGGGGCCGTT CTCATGA
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Protein sequence | MSRNVYTASS SPGASGDASA AERDTPTGET RLALMRRSRQ INRELARMYP DAHCELDFTT PLELLVATIL SAQCTDRRVN KVTPVLFARY RSAADYASAN QEELENIIRS TGFYRTKARN IIALGQRLCD EHGGEVPDRL EDLVKLPGVG RKTANVVLGN AFGVPGLTVD THFGRLVRRF GMTRQTDPVK VEQEIAALFP PEEWTMLSHR LIWHGRRVCH ARRPACGACE LQHLCPSYGE GPVDEETARR LVRTGPFS
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