| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0092 |
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| Symbol | |
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| ID | 3579671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 113933 |
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| End bp | 114925 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637683774 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_288153 |
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| Protein GI | 72160496 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01759] malate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.021843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGG CTCCAGTCAA CGTCACCGTC ACCGGCGCTG CCGGACAGAT CGGCTACGCA
CTGCTGTTCC GGATCGCCTC GGGCCAGCTC CTCGGCGTAG ACACGCCCGT TCGGCTCCGC
CTGCTGGAGA TCCCGCAGGC GATCAAGGCG GCCGAGGGTA CCGCGATGGA GCTTGACGAC
TGCGCGTTCC CGCTGCTCGC CGGGGTCGAC ATCTACGACG ACCCCCGCAA GGCGTTCGAC
GGCGTGAACG TGGCCCTGCT GGTCGGCGCC CGGCCGCGCA CGAAGGGGAT GGAGCGCCGC
GACCTGCTGG AAGCCAACGG CGGCATCTTC GGTCCCCAGG GTGCGGCCAT CAACGACGGT
GCCGCTGACG ACGTGCGCGT CCTCGTCGTG GGCAACCCCG CGAACACGAA CGCGCTGATT
GCGCAGGCGC ACGCCCCGGA CATCCCGGCG GACCGGTTCA CCGCGATGAC CCGGCTCGAC
CACAACCGGG CGCTGTCCCA GCTCGCCGCC AAGCTGAACG TGTCGGTGAG CGACATCAAG
AAGCTGACGA TCTGGGGTAA CCACTCCGCG ACCCAGTACC CGGACATCTT CCACGCCGAG
GTCAACGGCC GCAGCGCGGT GGAGGCCGTC AACGACGAGG AGTGGCTGCG CGACACGTTC
ATCCCGACCG TGGCCAAGCG TGGTGCGGCG ATCATCGAGG CCCGCGGCGC TTCCTCGGCT
GCGTCCGCGG CGAACGCTGC GATCGACCAC GTCTACGACT GGGTGAACGG TACCCCGGAG
GGCGACTGGA CGTCGGTGGC GCTGCCGTCC GACGGCTCCT ACGGCGTGCC GGAGGGCCTG
GTGTCGTCGT TCCCCGTGGT GTCCCGGAAC GGCTCCTGGG AGATCGTCCA GGGCTTGGAG
ATCAACGAGT TCTCCCGCGA GCGGATCGAC GCGTCGGTGC GCGAGCTGGA GGAGGAGCGG
GAAGCCGTCC GCGCTCTGGG TCTGATCAAG TAG
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| Protein sequence | MAKAPVNVTV TGAAGQIGYA LLFRIASGQL LGVDTPVRLR LLEIPQAIKA AEGTAMELDD
CAFPLLAGVD IYDDPRKAFD GVNVALLVGA RPRTKGMERR DLLEANGGIF GPQGAAINDG
AADDVRVLVV GNPANTNALI AQAHAPDIPA DRFTAMTRLD HNRALSQLAA KLNVSVSDIK
KLTIWGNHSA TQYPDIFHAE VNGRSAVEAV NDEEWLRDTF IPTVAKRGAA IIEARGASSA
ASAANAAIDH VYDWVNGTPE GDWTSVALPS DGSYGVPEGL VSSFPVVSRN GSWEIVQGLE
INEFSRERID ASVRELEEER EAVRALGLIK
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