| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0086 |
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| Symbol | |
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| ID | 3579721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 108704 |
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| End bp | 109843 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637683768 |
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| Product | DNA polymerase III subunit beta |
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| Protein accession | YP_288147 |
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| Protein GI | 72160490 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATTCC GAGTAGACCG CGACGCCTTC GCGGACGCTG TCACCTGGAC AGCACGGGCA
CTACCCGCAC GCCCCGCTGT TCCCGTGCTC GCGGGAATGC GCCTGGAGGT CGCCGACACC
GCCTCCGACA CCCTGCGGCT GTCCGGGTTC GACTACGAGG TTTCCGCTCA AGCGTCCGTG
GACGTCCACG CTGAGGAAGC CGGCAGCGTT CTCGTCCCCG GCCGTCTGCT CGCCGAAATC
GTCCGCACCC TGCCCCCGCA TCCCGTGGAA TTCCACGTGG AAGGCTCCCG AGCCCTTCTC
ACCTGCGGCA ATGCCCGGTT CACGCTGCTC ACTCTGCCGC TGGAGGACTA TCCGACCCTG
CCGGCCATGC CCCGCACGAT CGGCTCGGCT CCCGCGGACG TGTTCGCCAC CGCGGTACGC
CAGGTGCTCC CGTCGACCAG CCGCGACGAC ACGCTGCCCA TGCTCACCGG CGTGCACCTC
ACCTTCCGAG GCGACACGAT CCTGCTCGCC GCCACCGACC GCTACCGCAT TGCCGTGCGG
GAAATGTGGT GGAAACCGGA AGAGGTCGAC ATTGACACAT CCGCCCTGGT CCCGGCCCGC
ACCCTCGGCG ACTTCAGCCG GTCCCTGACG GGCGGCAACG TCGACATCGC CCTGTCCACC
AGCGACAGCC GAGGCGCAGG CGAAGGCATG ATCGGCTTCG AGCATGACGG CAAACGCACC
ACCACGCGGC TGATCGACAG CGACTTCGTC TCCTACGAGT CGCGGTTCCC CACCGAGTTC
GCCGCCCAAG CCGACGTTCC GGTCGCACCC CTGGCCGAAG CGGTGAAACG AGTAGCGCTG
GTCGCGGACC GCAGCACCCC GGTGCGGCTG TCGTTCACCT CCTCTGAGGT GGTGCTGGAG
GCAGGCTCCG GTGACGACGC CCAAGCATTG GAAGCCTTGG AGGTGAATTT CGAAGGCGAA
CCGATGCGTA TCGCGTTCAA CCCGCAGTAC TTCCTCGACG GGCTCACCAA CGTGGAGACG
GAGCGCGCCT TCCTCAGGTT CGTCGCCCCC ACCAGACCGG CGGTGATCAC TGGAACCCCG
GCGAAGGAAG GCGGAAAACC GGACTTCCGC TACCTGGTGA TGCCGCTCCG CTTGGCCTAA
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| Protein sequence | MKFRVDRDAF ADAVTWTARA LPARPAVPVL AGMRLEVADT ASDTLRLSGF DYEVSAQASV
DVHAEEAGSV LVPGRLLAEI VRTLPPHPVE FHVEGSRALL TCGNARFTLL TLPLEDYPTL
PAMPRTIGSA PADVFATAVR QVLPSTSRDD TLPMLTGVHL TFRGDTILLA ATDRYRIAVR
EMWWKPEEVD IDTSALVPAR TLGDFSRSLT GGNVDIALST SDSRGAGEGM IGFEHDGKRT
TTRLIDSDFV SYESRFPTEF AAQADVPVAP LAEAVKRVAL VADRSTPVRL SFTSSEVVLE
AGSGDDAQAL EALEVNFEGE PMRIAFNPQY FLDGLTNVET ERAFLRFVAP TRPAVITGTP
AKEGGKPDFR YLVMPLRLA
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