Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0085 |
Symbol | |
ID | 3579720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 107759 |
End bp | 108214 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637683767 |
Product | hypothetical protein |
Protein accession | YP_288146 |
Protein GI | 72160489 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.623619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCATCA GTGAGGCTGA TTTCGCTAAG TCGTCCATCA TGGCGGCCAT GCCGCTCGCC CGCATCCTCG GCGTGGAGTT CGTGGAGTTG GCAGAGGAGC GGGCGGTGAT GCGGCTCCCT GACAACCCTG ACCATTACGA CCACACTCAA AACCAGCACG CTGGAGCGCT GATCGTCCTC GCAGAGACCA CGTCGGGGGC AGCCGTGTTC AACGCCCTTG GCGACCGGCT CAAACTCGCG CTCCCCGTGT CCTTGGACGC CCGCGTCGAC CACCGCCAGC CGTTCTCCGG CCCCGTGGTC GCTGAAGCCG TGCTGGGAGA GGAGTGGCGC ACAGCCCTCA CAGAACTGGA AGCCGGGGGC CAACCCGAAT TCCCCGTGGA CGTGGCGCTG CGCGCCGAGA ACGGCTCCAC CACCGGCACG GCCACGATCA CGTGGATGCT GCGGCCCCAC CCCTAA
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Protein sequence | MVISEADFAK SSIMAAMPLA RILGVEFVEL AEERAVMRLP DNPDHYDHTQ NQHAGALIVL AETTSGAAVF NALGDRLKLA LPVSLDARVD HRQPFSGPVV AEAVLGEEWR TALTELEAGG QPEFPVDVAL RAENGSTTGT ATITWMLRPH P
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