Gene Tfu_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0085 
Symbol 
ID3579720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp107759 
End bp108214 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content67% 
IMG OID637683767 
Producthypothetical protein 
Protein accessionYP_288146 
Protein GI72160489 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.623619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCATCA GTGAGGCTGA TTTCGCTAAG TCGTCCATCA TGGCGGCCAT GCCGCTCGCC 
CGCATCCTCG GCGTGGAGTT CGTGGAGTTG GCAGAGGAGC GGGCGGTGAT GCGGCTCCCT
GACAACCCTG ACCATTACGA CCACACTCAA AACCAGCACG CTGGAGCGCT GATCGTCCTC
GCAGAGACCA CGTCGGGGGC AGCCGTGTTC AACGCCCTTG GCGACCGGCT CAAACTCGCG
CTCCCCGTGT CCTTGGACGC CCGCGTCGAC CACCGCCAGC CGTTCTCCGG CCCCGTGGTC
GCTGAAGCCG TGCTGGGAGA GGAGTGGCGC ACAGCCCTCA CAGAACTGGA AGCCGGGGGC
CAACCCGAAT TCCCCGTGGA CGTGGCGCTG CGCGCCGAGA ACGGCTCCAC CACCGGCACG
GCCACGATCA CGTGGATGCT GCGGCCCCAC CCCTAA
 
Protein sequence
MVISEADFAK SSIMAAMPLA RILGVEFVEL AEERAVMRLP DNPDHYDHTQ NQHAGALIVL 
AETTSGAAVF NALGDRLKLA LPVSLDARVD HRQPFSGPVV AEAVLGEEWR TALTELEAGG
QPEFPVDVAL RAENGSTTGT ATITWMLRPH P