Gene Tfu_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0042 
Symbol 
ID3579037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp43435 
End bp44493 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content67% 
IMG OID637683722 
Productaspartate semialdehyde dehydrogenase 
Protein accessionYP_288103 
Protein GI72160446 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACC GTCTTCCCAC TCTCGCCGTT GTGGGGGCCA CCGGTGCGGT GGGCACTGTC 
ATGTTGGACA TTCTTTCCAC GCGTAAGAAC GTGTGGGGGG AGATCCGCCT GGTGGCGTCG
GCCCGGTCTG CGGGCAAGCG GCTCACGGTC CGCGGCGAGG AGGTCGAGGT TCAGGCTATT
TCCCCGGAGG TCTTCGACGG GGTCGACGTG GCCATGTTCG ACGTCCCCGA CGAGGTGTCC
AAGGAGTGGG CGCCGATCGC GGCGGAGCGG GGCGCGGTTG TCGTGGACAA CTCTGGTGCG
TTCCGTTTGG ACGACGACGT GCCGCTGGTG GTGCCTGAGG TCAACGCCGA GCAGGTGCGC
AACCGTCCGC GCAACATCAT CAGCAACCCG AACTGCACGA CCCTGTCGAT GATTGTGGCG
ATCGGGGCGC TGCACCGGGC CTACGGGCTG ACGGACCTGG TGGTGAGCTC GTACCAGGCG
GCGTCCGGTG CGGGCCAGCA GGGGGTCGAC ACGCTGTACG ACCAGATCGC CAAGGTGGCG
ACGGACCGCA CGTTGGGTAC TCGTGCGGGG GATGTGCGGG CTGCGGTGAG CGACTTGGGT
CCGTTCCCGG CGCCGCTGGC GTTGAACGTG GTGCCATGGG CGGGGTCGTT GAAGGACGAC
GGCTGGTCGT CGGAGGAGTT GAAGGTCCGC AACGAGTCCC GGAAGATCCT CGGACTGCCT
GACCTGCGGG TGTCGGCAAC GTGTGTGCGC GTGCCGGTGG TGACCACCCA CTCGCTTGCG
ATCCACGCGA CGTTCTCCAC GGAGGTGGAT GCGGACGAGG CGCGGCGCCT GCTGGCTTCC
TCTCCTGGCG TGGTGGTCCA GGACGACCCG GCGAAGGGCG AGTTCCCGAC CCCGATTGAC
GTGGTCGGTA CGGACCCGAC GTGGGTGGGA CGGATCCGCC GTTCGCTGGA CGACCCGCGG
TCGCTGGACT TGTTCCTGTG TGGGGACAAC TTGCGTAAGG GTGCGGCGTT GAACACCGCC
CAGATCGCTG AGCTGCTCGC TGAGGAGTTC ACCAGCTAG
 
Protein sequence
MSNRLPTLAV VGATGAVGTV MLDILSTRKN VWGEIRLVAS ARSAGKRLTV RGEEVEVQAI 
SPEVFDGVDV AMFDVPDEVS KEWAPIAAER GAVVVDNSGA FRLDDDVPLV VPEVNAEQVR
NRPRNIISNP NCTTLSMIVA IGALHRAYGL TDLVVSSYQA ASGAGQQGVD TLYDQIAKVA
TDRTLGTRAG DVRAAVSDLG PFPAPLALNV VPWAGSLKDD GWSSEELKVR NESRKILGLP
DLRVSATCVR VPVVTTHSLA IHATFSTEVD ADEARRLLAS SPGVVVQDDP AKGEFPTPID
VVGTDPTWVG RIRRSLDDPR SLDLFLCGDN LRKGAALNTA QIAELLAEEF TS