| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0017 |
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| Symbol | |
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| ID | 3579779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 23403 |
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| End bp | 24821 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637683698 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_288080 |
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| Protein GI | 72160423 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00643877 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATATC CAGCGGAAGG CGGGCGGCGC CCACGGTTCT GGGCGACCGC GCGCGCCGCA
TTATGGACGA GCGCTTCGGC CCTCCTGCCC GGCCTCGCCC ACCTGCGCGC TGGGAAACGC
GCCGCAGGAG CCGGCATCCT CGGAGGATTC CTCCTGCTCG CCACCGCCGC CGGTGCGGCC
TTCTACCAAC TGCGCAGCGA CCTGTCCTGG CAGGCGTGGC TGGCTGCCCA GCCCTACTGG
GTGGAAGCGG TCGCCATCGG CGCCGTAGCC CTCGCCACCC TGTGGTCGAG CATCATCATC
CGGTCCTGGC AGCTCACCCG GCCGCGCCCC GAACGCTGGG GGTCCCGGGC CGTAGGCGCG
GTACTGGTCA CCGTCCTGTG CACCGCGCTC ATCGTGCCGT TCGCGTTCGT CGTCCGCACC
GCCGTCACCC TGCACAGCAC GCTGACCAGC GTGCTCGCCC CCGCCGAACC GGCGTCCCAG
GCTGCCGCCG ACACCCCGTG GCCCCACCGC TCCCATATCA ACGTCCTGCT CCTCGGCGGC
GACGCCGGCG ACAACCGGTA CGGGCTGCGC ACCGACACGA TGATCGTGGC CAACATCGAC
ATCGACAGCG GGGACACGGT CCTCATCAGC GTGCCCCGCA ACCTGGAAAA CGTGCCGTTC
CCCGAAGGCA CAGCGCTCGC GGAACGCTAC CCGGAGCCCT ACGGATTCGA CGACCTGCTC
AACGAGGTCT ACCAGACGGT GGCTGAAGAA CCCGAGGAGC TGGCCATCAA CCCCGACGCG
CCCGATCCAG CCGCGGACAC GCTGAAGCAC GTCATCGGGC ACGCACTCGG CATCTCCATC
GACTACTACG CTCTCGTGGA CCTCCGCGGG TTCGCGGACC TCATCGACGC GATCGGCGGC
GTGGTCGTCC CCGTGGAAGA ACCCATCCGC TACGGCCGCC GCGGCGAAGG CCTGCTCGAA
CCAGGGGAGC GGCGCATGAG CGGCAAAGAA GCGCTGTGGT ACAGCCGCAG CCGCACAGAC
AGCGACGACT ACGCCCGCAT GGGCCGCCAA GGCTGCCTGT TGAAATACGT CGCGGAGCAG
ACCAACCCGG TGACAGTGCT GCGCCGCTTC GACGAACTCG CCGACGCCAC ACAGCGCACC
CTCACCAGCG ACATTCCCCC TTCCCACCTG CCTGCCCTCG TCGACCTGGC CAGGCGGGTC
TCCCAAGCGC GCATGCACAC CCTGCAGCTT TCCCCGCCCC AGGTCACCAC CGCGCACCCC
GACTGGACGG AGATCCGCAC ACTCGTCGAC AGGGCGATCC GCAGCAACGG CGAAGACCAC
GGCCCTGCCG ACACCGCCAA GCAGCCGTCA CCGTCCCCCG ACAGCCCTGG CCGCCAGATC
GGGAAAAAAC CGGTCTCGCT CGACAGGCTC TGCCCATGA
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| Protein sequence | MAYPAEGGRR PRFWATARAA LWTSASALLP GLAHLRAGKR AAGAGILGGF LLLATAAGAA
FYQLRSDLSW QAWLAAQPYW VEAVAIGAVA LATLWSSIII RSWQLTRPRP ERWGSRAVGA
VLVTVLCTAL IVPFAFVVRT AVTLHSTLTS VLAPAEPASQ AAADTPWPHR SHINVLLLGG
DAGDNRYGLR TDTMIVANID IDSGDTVLIS VPRNLENVPF PEGTALAERY PEPYGFDDLL
NEVYQTVAEE PEELAINPDA PDPAADTLKH VIGHALGISI DYYALVDLRG FADLIDAIGG
VVVPVEEPIR YGRRGEGLLE PGERRMSGKE ALWYSRSRTD SDDYARMGRQ GCLLKYVAEQ
TNPVTVLRRF DELADATQRT LTSDIPPSHL PALVDLARRV SQARMHTLQL SPPQVTTAHP
DWTEIRTLVD RAIRSNGEDH GPADTAKQPS PSPDSPGRQI GKKPVSLDRL CP
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