Gene Tfu_0013 details

Gene Information

• Locus tag: Tfu_0013
• ID: 3579775
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 18230
• End bp: 18988
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 637683694
• Product: putative integral membrane protein
• Protein accession: YP_288076
• Protein GI: 72160419

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.287986
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGGGCT TCAGCCATGC GACCACCGGA GTCCTGGTCG GAGTCGCTGT CGCTGCTCCG 
CTCGCTGCCG CCGCGGGCAC CCCTCCCACC CCCATGGGCC TGCTGGCGTG GGCGTTACTC 
GGCGCGGGCT CGGCCTTAGT CCCCGACCTC GACCATCCCT CCTCGACCGC CACCCGCTCC 
CAAGGGTTCG TCACCGGCCT GCTGTCCCGG GGAATGCGCG CCCTGTCGCT CGCCGTCTAC 
CGGCGCACCC GAACCCCAGC CGACCGCTCC GACGGGGAAC ACCGCCACCT AGGCCACACC 
CCCGTCTTCG CGGCCGCAGT CGGCGCAGTG ATCGGCCTGC TCTGCCACCT GTCCTGGTGG 
GCGACCCTGG TCACCGCATG GTTCCTGGCT TTTCTCGGCC TCCGCGCGCT CCGCAAAGTC 
GCGTGGCGGG GACTGCGTAC CGCGCTCGGC TCGTGGCCGG GCGCGGCCCT CGGCGCGCTC 
TGCGTGGCCG CACTGTTCCT GACCGCGTGG GACAACTACC CGCCCGGGTG GATCGTCGGC 
GCCGTCGTCG CCCTCGGCAT GATCGTCCAC TCCCTAGGAG ACGCGCTCAC CTCCTCGGGA 
GTTCCCCTCG CCTGGCCGTT CACCGTCAAC GGCCGCCGCT GGGCCATGCT CGGCGTGCCC 
CGGTGGATGC GGTTTCGTAC CGGAACCTGG CCGGAATGGG TGGTGGGGGC CGTGTCCCTC 
ACCGGATCGC TCGCCGTCGG CTACGCGCTC GTCGCCTAA 

 

Protein sequence

MMGFSHATTG VLVGVAVAAP LAAAAGTPPT PMGLLAWALL GAGSALVPDL DHPSSTATRS 
QGFVTGLLSR GMRALSLAVY RRTRTPADRS DGEHRHLGHT PVFAAAVGAV IGLLCHLSWW 
ATLVTAWFLA FLGLRALRKV AWRGLRTALG SWPGAALGAL CVAALFLTAW DNYPPGWIVG 
AVVALGMIVH SLGDALTSSG VPLAWPFTVN GRRWAMLGVP RWMRFRTGTW PEWVVGAVSL 
TGSLAVGYAL VA