Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0012 |
Symbol | |
ID | 3579774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 16874 |
End bp | 18202 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637683693 |
Product | hypothetical protein |
Protein accession | YP_288075 |
Protein GI | 72160418 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0758862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCAGC TTTTCGTCGC CAGCACGTTT TTCGGTGCGA TGTCGCTTGC TGCCGCGTTG GACGCGGGCC AGTTCGGTGC GGCAGACCAG CGGCGCATCC TCGTGGTGTC GAACAATGCG CTCGTGCCCG AGGTGGTTCC GCCGTTGGAT GCCGCCCCCG GGTTTGATGT GCTGCGGTCG CGTTTCGGGG AGGTGGTGTC CTGGAACGAG CTGCTGTGGC CGTTCCACCC GTCCACATGG CAGCCGCGAC AGCAGGAGCG GCCGCTTCTG AACCGGCTGC TGCGCCATTA CTGGGATCTG GCGGAGGACG AGCCGCTGCA CCTGGTGGTG GAGTCCATTC AAGTGCCGCC GGCGCGGGCG TTCGCTTCCG TGTTCGACGA TGCCGCGATC ACCGTGTACT CCGACGGGTT GATGAGCTAC GGCCCGACCC GGGAGTCGCC GCCGCGCGAG GTCGCCACCC GTATCGACCG GGTCCTCTAC CTTGACCTGG TGCCCGGGGT GGAGCCGCTG CTGCTCAGCG AGTACGGGGT TGCGCGCCGC ACGATCAGCG GTGAAGCGTT TCGTGCCGTG GTGGCCGAGG TAGCGAAAGC TGTGGACGGG GTGGGGGAAC GCACGGCGTG GGCGGGGGCG CCGCTCCTGC TCGGCCAGTA TCTTGCGGCG CTCAACTTTC TTACCGCGGC TGAGGAGGAT GCGCTGCACG CGCGCATGCT GCGCGGGGTG GCTGCCCAAG GCCACCGCAC AGTGCTGTTC AAACCGCACC CGTCAACCAC AGCGCGCACG TTCCGGACGT TGCACGCCAC CGCTGAACAG CAGGGGGTGC AACTGGTGGT GCTCGACGAG CCGGTGCCCG TGGAAGTGTG GTACGAGGTG CTGCGCCCGG CTCTCGTGGT AGGTGTGTTC TCTACGGGGT TGAGTACCGC GTCCCGCTAC TACGGTCTGC CAGTGGCGAC CGTGGGCACG GAACTGCTGC TGGATCGGAT CACCCCGTAT CAGAACAGCA ACCGGATTCC GGTGACGCTC GCCGACGCCA CGATGCCGCG GCTGGCCGAG GACGGTACCG TGCACCCGCC GCGGATCACC GCCGACCGGG TAGCGGAGGA GCTGCTGCCG CTGCTGGTGG CGGTGGGCTA CTGCATGCAG AACAGCGTGT ACTCGCATCT GCGGGACGAG GCCGTAGCGT ATCTGTCCCG CGGGCTTGAC GAGGTGACGC GCCGCTATTT CAAGAAGCGG CGGCTCACCG CGCTGCGGCT GCCCGGCGCT GCCCCCGCCA AGCCGCGCTC GCTGCCTTGG CTGGCTGCCC GGGTGCGCCG CCTGCGGGGA CGGTCCTGA
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Protein sequence | MAQLFVASTF FGAMSLAAAL DAGQFGAADQ RRILVVSNNA LVPEVVPPLD AAPGFDVLRS RFGEVVSWNE LLWPFHPSTW QPRQQERPLL NRLLRHYWDL AEDEPLHLVV ESIQVPPARA FASVFDDAAI TVYSDGLMSY GPTRESPPRE VATRIDRVLY LDLVPGVEPL LLSEYGVARR TISGEAFRAV VAEVAKAVDG VGERTAWAGA PLLLGQYLAA LNFLTAAEED ALHARMLRGV AAQGHRTVLF KPHPSTTART FRTLHATAEQ QGVQLVVLDE PVPVEVWYEV LRPALVVGVF STGLSTASRY YGLPVATVGT ELLLDRITPY QNSNRIPVTL ADATMPRLAE DGTVHPPRIT ADRVAEELLP LLVAVGYCMQ NSVYSHLRDE AVAYLSRGLD EVTRRYFKKR RLTALRLPGA APAKPRSLPW LAARVRRLRG RS
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