Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0003 |
Symbol | |
ID | 3579764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 4002 |
End bp | 4886 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637683683 |
Product | 6-phosphogluconate dehydrogenase-like protein |
Protein accession | YP_288066 |
Protein GI | 72160409 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1023] Predicted 6-phosphogluconate dehydrogenase |
TIGRFAM ID | [TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00130229 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTCG GCATGATCGG CCTCGGCAAG ATGGGCGGCA ACATGGCCGC ACGGCTGCGC GACAAGGGGC ACGAGGTCAT CGGCTACGAC GTCAACCCCG AGCTGCGCGA CGTGGACTCC ATCGCCGAAC TCGTGGAACG ACTGTCCGCC CCGCGGACCG TGTGGCTGAT GGTGCCGGCC GGGGAGCCCA CCCGGAACAC GATCCGGGAG CTCGCCGACC TCCTCGACGA GGGCGACCTC GTCATCGAAG GCGGCAACTC CCACTACCGG GACGACCGCG TGCACGCCGA CGAACTCGCC CGCCGCGGCA TCGAATACCT TGATGCGGGA GTCAGCGGCG GAATCTGGGG ACGCGAAAAC GGCTACGGCA TCATGGTCGG CGGCAGCGCC GAGAACGTGG CCCGCGCCAA GCCGATCTTC GACGCCCTCA CCCCCGAGGC CGGGAGCGGG TTCGTCCACG CCGGGGAAAT CGGTGCCGGG CACTTCGTCA AGATGGTCCA CAACGGCATC GAATACGGCA TGATGCAGGC CTTCGCCGAA GGCTACGAGC TCATGGCCGC CTCTGGGATC GTCAAAGACG TCCCCGGCAC GCTCGCCAGT TGGCGCCAAG GCACCGTGGT GCGCTCCTGG CTGCTGGACC TGCTGGTCCG CGCCCTGGAA GAAGACCCCG AGCTGGAGCA GTTGCGCGGA TACGCTGAAG ACTCCGGTGA AGGACGCTGG ACCGTGCAAG CCGCCGTTGA CCACGCGGTG CCCGCCCCAG TTATCACCGC CGCCCTGTAC GCCCGGTTCG CCTCCCGGCA GGAGGACAGC CCGGCGATGA AAGTCATCGC CGCACTCCGC AACCAGTTCG GCGGGCACGC GGTCGTCAAG AAGAACACCG ACTAG
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Protein sequence | MQLGMIGLGK MGGNMAARLR DKGHEVIGYD VNPELRDVDS IAELVERLSA PRTVWLMVPA GEPTRNTIRE LADLLDEGDL VIEGGNSHYR DDRVHADELA RRGIEYLDAG VSGGIWGREN GYGIMVGGSA ENVARAKPIF DALTPEAGSG FVHAGEIGAG HFVKMVHNGI EYGMMQAFAE GYELMAASGI VKDVPGTLAS WRQGTVVRSW LLDLLVRALE EDPELEQLRG YAEDSGEGRW TVQAAVDHAV PAPVITAALY ARFASRQEDS PAMKVIAALR NQFGGHAVVK KNTD
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