| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_4142 |
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| Symbol | |
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| ID | 3566642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 4441175 |
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| End bp | 4443925 |
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| Gene Length | 2751 bp |
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| Protein Length | 916 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637682614 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_287338 |
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| Protein GI | 71909751 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAAA CCCTTTTGCG CCAGCTCAAA CGCAGTATCG GTGTCGGTAG CGAAGCCGAA
CTGGCAGACT TGCTCGCGTC GATACGGACT GCTGGCACGA CGCTAGAGCC GGCTTTCCGG
GGGATTCTTG AAGGCCTGGG CGACCTCCTG AGCAGGGTCG ATGCCAGTTA CGAACAGTAC
GAACGTGATC TTGAACTGCG CACGCGCAGC CTTGAGATTT CGTCGGCCGA ACTTTCAGCC
GCCAACGAAA AACTCCGCCA GTCCCTTGCC GGGCGGGATA ACGCACTGCG CTCGCTCCGA
AAAACCATCC GTGACCATCT GCCGGAAGCC AATGAAGATG CCGAGACACT GGCCGAAGAG
GATATCGCGG TACTTTCCAG GCGCGTCGCG GCCATGGTCG CCGAAAGCGA ACATGGCTTA
CGGGAACTGG CCAACCAGAA GTTTGCTCTC GACCAGCATG CCATCGTCAG CATCACTGAT
ACGGCCGGCA TTATCACCTA TGCCAATGAC CGCTTCTGCG CCATCAGTGG CTACGCACGG
GAAGAACTGA TCGGGCAGAA CCACAGGATC GTCAACTCCG GCATCCATCC GCCTGAGTTG
TTTCGCGATA TGTGGCACAC CATCGTACTG GGCAAGGTTT GGCACGGTGA AGTTTGCAAC
CGCGCACGCG ATGGGCACCT TTATTGGGTC AATGCGACGG TCGTGCCGCT GCTCGATGCC
AAGGGTGAGC CTGAGCGATA TATCGCCATT CGTACCGAGA TCACCGACCG CAAGCGCATG
GAGGCGCAAT TGTCGGAACA ATTGCACCTG GTTGAAGAAC TGATCGAAAA CATTCCCCTG
CCGATCTACC TGAAAGACGG CAGCGGGCGC TATATCAGAC TCAACCGCGC TTTCGAACAG
TTCTTTGAGG TTCGCCGCGA AGCCTTCATC GGGCGCACGC TGCACGATCT TTTGCCAGCA
GAAGACGCTC GTCAGCATGC AGAAATGGAT GCTGATCTTT TTGCCGCCAA GGGCACGCAA
ACCTACGAAG CCACAGTCCA TAGCCAGGAC GGCATCGCTC ACGAAACAAT TTACCGCAAA
GCGGTATTGA CCCGCCGCGA CGGCAGCGTT TCGGGATTAC TCGGCATCAT TGTCGACATC
ACTGACCGGA AACGAGCAGA GATCGAGGTG CTGCGGGCCA AGGAAGCGGC GGAAGCGGCC
AACCGGGCAA AGAGTGATTT TCTGGCTAAC ATGAGCCACG AAATCAGGAC ACCGATGAAC
GGGGTCATCG GCATGACGGA TCTCGCCCTC GAAACCGCAT TGACCGAGGA ACAACGTGAA
TACCTAAACA TCGCAAAATC CTCGGCCGAA TCCTTGCTCA CCGTCATCAA CGACATCCTC
GATTTTTCGA AGATTGAAGC CGGGAAGCTA CAGGTCGAAG ACATCCCCTT TGACCTGCAT
CGTCTGATTG CCGACACACT GAAACCGCTG GCGCTGCGGG CCCATGAGAA AGACATCGAG
ATACTCAGTG ACGTAGTGCA TGACGTTCCC CGATTTGTTA AGGGCGACCC CAGCCGGATC
CGGCAGGTAC TCGTTAACCT GGTCGGCAAT GCCATCAAAT TCACCGAACA GGGCGAGATT
GCCCTCCAAG CTGACTTGAT GCAGCTTCAG AACGGCCACG CTGTCATCCA CTTCGCAGTG
CGCGATACGG GGATTGGCAT CTCGGCCGAC AAGCAGATGC TGATTTTCGA TGCCTTTGCC
CAGGAAGACT CGTCGACCAC CCGGAAATAC GGAGGCACCG GCCTGGGCCT CTCGATTTGT
CGCCGCCTGG TCGAGTTGAT GGGCGGTACG TTGTGGTTAC ATAGCGAGCC GGGCAAGGGG
AGTACCTTTC ATTTCTCAGT CCAGTTGCAG ATCTCGGAAA ACGCTATTCC GCTCGTGATT
CACCCTGTCG ACGTGACGGG CCGTCACATG CTTATCGTTG ATGACAACGC CACTAACCGG
CGCATTCTCC GCGGCATGCT GGCCACCTTG CATGTCACTT GCCAGGAAGC CGACTCGGGA
AAGACAGCAC TAGCGCTGAT GCGTGAGCAA GGCAGCCAGT TCGATTGCAT CCTGCTCGAT
GCCCAGATGC CTGAGATGGA TGGTTATGAG CTTGCCCGCC ATCTGCACGC CGAGCATCCC
GCTTTGCCCC CAATGTTGAT GCTCTCCTCG GGTGCCCTGC GGGGTGATGC GCTACGTTGT
CAGGAGGCCG GCATTGCCGG ATTCTTCGCC AAGCCGATCT CATCAGACGA ATTGCTCTCC
GCCCTTGGCC GCCTGTTCGA TAACAGCCCA AAGGAATCCT CACCGGAACC CAGCCCGCTA
CTGACACGCC ACTCCCTGCG CGAGGCGCAA CGCGTCCTGA ACATCCTGCT GGTCGAAGAT
CATCCGACCA ACCAGAAGTT GGCGCTCGGC CTCCTCAACA AATGGGGGCA CCATGGAACA
TTGGCCCAAA ATGGACAGGA AGCCCTCGAT ATCCTTGCCA GCCAATCCTT CGACATCATC
CTGATGGACA TGCAAATGCC CGTCATGAGT GGTGTCGAGG CGACCCAGCG CATTCGGGCG
CGCGAAGCGG CCATGCAACT ACCGCGCACC CCCATCATCG CGATGACTGC CGCAGCCATG
CAAGACGACC GGGATGCTTG CCTGGCTGCC GGAATGGATG ACTATCTGGC AAAACCAATC
AAGGTCAAGG AGTTGCAAGC ACTGCTGCTT GCCTACACTT CCGCCCCATA A
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| Protein sequence | MQKTLLRQLK RSIGVGSEAE LADLLASIRT AGTTLEPAFR GILEGLGDLL SRVDASYEQY
ERDLELRTRS LEISSAELSA ANEKLRQSLA GRDNALRSLR KTIRDHLPEA NEDAETLAEE
DIAVLSRRVA AMVAESEHGL RELANQKFAL DQHAIVSITD TAGIITYAND RFCAISGYAR
EELIGQNHRI VNSGIHPPEL FRDMWHTIVL GKVWHGEVCN RARDGHLYWV NATVVPLLDA
KGEPERYIAI RTEITDRKRM EAQLSEQLHL VEELIENIPL PIYLKDGSGR YIRLNRAFEQ
FFEVRREAFI GRTLHDLLPA EDARQHAEMD ADLFAAKGTQ TYEATVHSQD GIAHETIYRK
AVLTRRDGSV SGLLGIIVDI TDRKRAEIEV LRAKEAAEAA NRAKSDFLAN MSHEIRTPMN
GVIGMTDLAL ETALTEEQRE YLNIAKSSAE SLLTVINDIL DFSKIEAGKL QVEDIPFDLH
RLIADTLKPL ALRAHEKDIE ILSDVVHDVP RFVKGDPSRI RQVLVNLVGN AIKFTEQGEI
ALQADLMQLQ NGHAVIHFAV RDTGIGISAD KQMLIFDAFA QEDSSTTRKY GGTGLGLSIC
RRLVELMGGT LWLHSEPGKG STFHFSVQLQ ISENAIPLVI HPVDVTGRHM LIVDDNATNR
RILRGMLATL HVTCQEADSG KTALALMREQ GSQFDCILLD AQMPEMDGYE LARHLHAEHP
ALPPMLMLSS GALRGDALRC QEAGIAGFFA KPISSDELLS ALGRLFDNSP KESSPEPSPL
LTRHSLREAQ RVLNILLVED HPTNQKLALG LLNKWGHHGT LAQNGQEALD ILASQSFDII
LMDMQMPVMS GVEATQRIRA REAAMQLPRT PIIAMTAAAM QDDRDACLAA GMDDYLAKPI
KVKELQALLL AYTSAP
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