| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_4088 |
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| Symbol | |
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| ID | 3566852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 4382404 |
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| End bp | 4384656 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637682560 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_287284 |
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| Protein GI | 71909697 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGTATC GCATCCATCC GTTGGCGGCG GCGTTGGCCG TCGCCTTTTC ATCGTTGGCA
GCGCAACAGG CAGCCGCCCA AACAACATTG AATGAGGTAG TGGTTAGCGC GAGCAAGATT
CGTGACGCGG CCACGCCGCA GCAAATCGGC TCAGCGGAAA TTGCCGCCCA GCATGCCATC
ACCCGCGATA CAGCGGCCTT GCTGCGCGAT GTACCCGGCG TCAGCCTGTA CGGTGCCGGC
GGTGTATCCA GCCTGCCCGT CATCCATGGC CTAGCCGACG ACCGCCTGCG CATCACCGTG
GATGGCATGG ACTTCATCGC CTCCTGCCCC AACCACATGA ACCCACCGCT TTCCTACCTT
GACCCAACCA ACGTATCGAA GATCAAGGTA TTTGCTGGCA TCTCTCCAGT CAGCGTTGGC
GGGGACAGTA TCGGCGGCGC CATCGTTGCC GAGTCGGCCG CTCCCCAATT CGCGACACCG
GACCAGGGCC TCCTGGCCAA GGGTGAAATC GGCGCCTTCT TCCACAGCAA CAACAATGCT
CAGGGCGGCA ACCTTTCTGC CACGCTAGCA ACCGAAAACA TCAGCATCAG CTATACCGGC
GCCCTGGCCA AGGCTGACAA CTACAAGGCT GGCGGCAATT TCAAGACGTG GACAACGACT
GGCCGCATTG GCCACACGCT GGCCCTCGAC GAAGTCGGCT CGACGGCCTA CGAAAGCCGC
ACCCACACCC TCGGCTTCGC CGTGCGTGGC GGCAACCACC TGGTCGAAGC CAAGTTCGGT
TATCAGGACG TTCCCTACCA GCTCTACCCC AACCAGCGGA TGGACATGCT GGATAACGAG
CAGAAGCGCA TCAACCTGCG CTATCTCGGC CAGTACGACT GGGGTACGTT CGAAGCTCGC
GCTTACCATG AGACGGTGGA TCACTTCATG GACTTCGGGG CAGACAAGCG GTATTGGTAC
AGCGGCATGT CGGGTGGGTC GAACTCTCTT AACGGCACCC CCTGCTCACC AATCACGGGC
GGCATGTCAG GCTGTGCTGC AGGCATGCCG ATGTACACAA GCAGCAAAAC GACAGGTGTC
AATCTGAAAG CCGATATCGA GCTCGGCGCC AATGATCTGC TGCGCATCGG TACGTTGTAC
CAGCACTACA CGCTCAACGA CTGGTGGCCG GCCTCCGGCG GCGGCATGTA CCCCAATACC
TTCGACAATA TCAAGGATGG CAAGCGTGAT CGCCTCGGCG CTTTTGCGGA ATGGGAACGC
CGTATCGGCA AGCAATGGAC AACCTTGCTC GGCGCTCGGT ACGAGCGGGT TGAAACCGAT
GCCGGTGATA TTCAGGGCTA TAGCAGCAGT TACGCTACGG ATGCGAACAC CTTCAACAAC
CGCGACCATA ACCGCAGCGA CAACAATGTC GACCTGACAG CCCTCGCCCG GTACACGGCG
AACAACATGT CCGACATAGA GTTCGGACTG GCCCGCAAGG TTCGTTCGCC CAACCTGTAC
GAGCGCTACA CCTGGTCGAC TTCGACCATG GCCGCATTGA TGAACAACTT CGTCGGCGAT
GGCAACGGCT ATGTCGGCAA CCTCGATCTG AAACCGGAAA AGGCCTACAC CGCTTCCTTC
ACCTTCGACT GGCATGCAGC AGACCGTAGC TGGGAACTGA AGGCAACCCC GTACTACACC
CATGTCGATG ACTACATCGA TGCAACACGC CTGACTGCTT TCGCGAACAC GAACAACCAG
TTTGTCGTCC TCAAATACGC CAACCAGTCC GCCCGCCTCT ACGGCCTCGA CCTCTCCGGC
CGCATGCCGC TGGCTAAAAC CGGCTTGGGT GAGTTCGGCC TGCGCGGCTT GATGAACTAC
ACAAAAGGTG AAAACCGCGA CACCGGCGGT AACCTGTACA ACATCATGCC GCTCAACGGA
AAACTGGCAC TCACGCACCA ATACGGCAGC TGGAGTAACG CACTTGAACT GGTCGGGGTA
AGCGGCAAGA ACGATGTTTC CTCGGCCCGC AACGAGATCC ACACGGCTGG CTACAGTCTG
ACCCATCTGC GTACCAGCTA CACGTGGAAA AACGTCCGTA TTGACCTCGG TGTCGAGAAC
CTCTTCGACC GTTTCTACTA CTTGCCGCTC GGGGGGGCCT ACACCGGCCA GGGCACCACC
ATGAGTACTA CTGGCACTTA TTCGCCGGCC TGGGGCATTG TAGTTCCCGG TATGGGGCGT
TCGATTTACG CTGGACTCAA CGTCAAGTTT TAA
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| Protein sequence | MGYRIHPLAA ALAVAFSSLA AQQAAAQTTL NEVVVSASKI RDAATPQQIG SAEIAAQHAI
TRDTAALLRD VPGVSLYGAG GVSSLPVIHG LADDRLRITV DGMDFIASCP NHMNPPLSYL
DPTNVSKIKV FAGISPVSVG GDSIGGAIVA ESAAPQFATP DQGLLAKGEI GAFFHSNNNA
QGGNLSATLA TENISISYTG ALAKADNYKA GGNFKTWTTT GRIGHTLALD EVGSTAYESR
THTLGFAVRG GNHLVEAKFG YQDVPYQLYP NQRMDMLDNE QKRINLRYLG QYDWGTFEAR
AYHETVDHFM DFGADKRYWY SGMSGGSNSL NGTPCSPITG GMSGCAAGMP MYTSSKTTGV
NLKADIELGA NDLLRIGTLY QHYTLNDWWP ASGGGMYPNT FDNIKDGKRD RLGAFAEWER
RIGKQWTTLL GARYERVETD AGDIQGYSSS YATDANTFNN RDHNRSDNNV DLTALARYTA
NNMSDIEFGL ARKVRSPNLY ERYTWSTSTM AALMNNFVGD GNGYVGNLDL KPEKAYTASF
TFDWHAADRS WELKATPYYT HVDDYIDATR LTAFANTNNQ FVVLKYANQS ARLYGLDLSG
RMPLAKTGLG EFGLRGLMNY TKGENRDTGG NLYNIMPLNG KLALTHQYGS WSNALELVGV
SGKNDVSSAR NEIHTAGYSL THLRTSYTWK NVRIDLGVEN LFDRFYYLPL GGAYTGQGTT
MSTTGTYSPA WGIVVPGMGR SIYAGLNVKF
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