Gene Daro_4039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_4039 
Symbol 
ID3567036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4339471 
End bp4340484 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content61% 
IMG OID637682511 
ProductBeta-lactamase-like 
Protein accessionYP_287235 
Protein GI71909648 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTC GCCTTTTCCT GCGCTCCGTG GCTGCCATCT CGGCGCTGGG GGCGGCCGAG 
TTCGCCCCGT GGCAGGCGAT GAGCGCCTTC GCCGAAGAGA TCAGCGATTT CGTGCGTGGC
CCGGCAATCA AGGACTATCC GCTGCGCCAG ATCTCGAAGC ATGTCTGGAT CATCTTCACG
CCCGATGCTT TCCCGACGCC GGAAAACCAG GGGATGATGA GCAACGTCAC CTTCGTCAAC
ACCAGCCAGG GTATCGTGGT CGTCGATACC GGTGCTTCGG TGCAGATCGG CGAAATGTCC
ATCCGGCAAC TGGAGCGCTC GCTGAAAAAG CCGGTCATCG CGATCATCAA CACCCATTAC
CACGGTGACC ACTGGCTGGG AAATCATGCC TACGTCGATC GCTACGGCAA CAGCCTGCCG
ATCTATGCCC ACCCCGGCAC CATTCAGGCA GTCAAGGGAA TTCAGGGCAG TCTGTGGCTG
ACGCTGATCG AAAAGGCGAC CAACCAGGCC TCGCTCGGCA CCCGTATCGT GCCACCCAAT
ACGCCGCTCG AACATGGGGC CGTGCTCAAG TTTGGCGATG TGACCCTGCG CATTCATCAC
TATGGCACCG TGCACACGCC CTTCGATCTG TGTGTCGAAG TGGTCCAGGA CGGCGTGACG
CTGGTTGGCG ATATTGCGAT GGACCGGCGC ATTGCCAATA TGGATGACGG TTCCTATCTC
GGCACTTTCA AGGCCTACGA CACGCTGGTC AAGAAGACGG GAACCCGGAT CTGGCTGCCG
GCGCACGGCG AACCGGGCGA ACACGTGCTG AAATGGAACC GCGAACTGTT CGAAGGCATC
TACCGCCCCT GCGAGCAGGC CGTCAAAAAT GGACTACCGC TCGAAGAGGC CAAGGCGCTG
GTTCTCAAGG ACCCGCGCGT CGCCAGCCGG GCCCGGGAAA CCAGGGGTTT CGAGGCGAAT
ATCGGCAAGT ACGTCAGCAT CGCCTACCTG GAGGCCGAAG CGGCCGGCTT CTGA
 
Protein sequence
MNRRLFLRSV AAISALGAAE FAPWQAMSAF AEEISDFVRG PAIKDYPLRQ ISKHVWIIFT 
PDAFPTPENQ GMMSNVTFVN TSQGIVVVDT GASVQIGEMS IRQLERSLKK PVIAIINTHY
HGDHWLGNHA YVDRYGNSLP IYAHPGTIQA VKGIQGSLWL TLIEKATNQA SLGTRIVPPN
TPLEHGAVLK FGDVTLRIHH YGTVHTPFDL CVEVVQDGVT LVGDIAMDRR IANMDDGSYL
GTFKAYDTLV KKTGTRIWLP AHGEPGEHVL KWNRELFEGI YRPCEQAVKN GLPLEEAKAL
VLKDPRVASR ARETRGFEAN IGKYVSIAYL EAEAAGF