Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_4022 |
Symbol | |
ID | 3567194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 4321327 |
End bp | 4321878 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637682495 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_287219 |
Protein GI | 71909632 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.000610281 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCACG GCTTCGAGAT CGAGGGCGCC GTCAAAGCGC CCGAAATTCC CGAAACGGGG ATACTCGGTG GGATCAATCG AGTGATGACG GGCTTGCACA CGGCGATCAT GTTCCTGTCG TCCGGGGCCT TGCTCGGCGC TGCCCTGATC CTGTGCAGCA GCGTCTTCCT GCGCTATTTC CTGAAAATCC CGACCGACTG GCAGGACGAG ATGTCGGTTT TCCTGCTCGT CGGCGCCACC TTCATGTGTG CCGGCTACGT TCAGTCGCAA CGCGGCCATA TCGGCATCGA GGCGCTGGGC GGGCTGTTGC CGCCCCTGGC CAACCGCCTG CGCCTGCTCT TCTGCGATCT GGTGTCCCTG CTTTTCTGCG CTTTCTTTTC CTGGAAATCG ATCCTGCTCT TTCACGAAGC CTGGGTTGAC GGACAAACCA CCTCGTCCTC ATGGGCACCG CCGCTGGCGA TTCCCTATGG CTTCATGACC GCCGGCATGA TCCTGCTCTC GCTGCAGATC CTGCTCCAGC TGGTCGCTGG CATCGTTCGC AAGGAGCACT AA
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Protein sequence | MSHGFEIEGA VKAPEIPETG ILGGINRVMT GLHTAIMFLS SGALLGAALI LCSSVFLRYF LKIPTDWQDE MSVFLLVGAT FMCAGYVQSQ RGHIGIEALG GLLPPLANRL RLLFCDLVSL LFCAFFSWKS ILLFHEAWVD GQTTSSSWAP PLAIPYGFMT AGMILLSLQI LLQLVAGIVR KEH
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