Gene Daro_4018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_4018 
Symbol 
ID3567190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4317076 
End bp4317978 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content66% 
IMG OID637682491 
Productmalonate decarboxylase subunit beta 
Protein accessionYP_287215 
Protein GI71909628 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR03133] malonate decarboxylase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCT CGCTAGCCAA GCACCAGAGC TGGTTTGAAG CGACGGCGCG CAAACGCGTG 
GCCGGGCTGC TCGATGCCGG CAGTTTCAAT GAAATCCTGC CGCCAGCGGC CTCAATGCCC
AGCCCTCATC TGGCCCAGCT CGACCTGCCC GGTGCGTTCG ATGACGGCGT TGTCGTCGGC
ACTGGTCAAC TGAGTGGAAA GCCGATTTAT GTCATTGCCC AGGAAGGCCA GTTCATGGGC
GGCGCCGTCG GCGAAATCCA CGGCGCCAAG ATTGTCGGCC TGCTACGCCG CGCGGTAGCC
GAGAAGCCGG CGGCCGTGCT GTTCCTGATC GATTCCGGCG GCGTCCGTCT GCACGAGGCC
AATGCCGGGC TGATCGCCAT TTCCGAAATC ATGCGTGCCG TGCTCGACGC CCGCGCGGCC
GGCGTGCCGG TCATCGCGCT GGTCGGCGGC AGTTGCGGCG CCTTCGGCGG CATGGGCATC
GTCGCCAAAC TGTGTTCGGC CATCCTCATT TCCGAAGAAG GCCGCCTGGC GCTGTCCGGG
CCGGAAGTCA TCGAGACGGT CGCCGGCGTC GAGGAATTCG ATTCGAAAGA CCGGGCGCTG
GTCTGGCGCG TTACCGGCGG CAAGCATCGT TACCTGATGG GTGACTGTGC CGCCTTGGTC
GAGGACGACA TTGCCGCTTT CCGCGCCGGT GCCAGCGAAT TTGTGGCGAC CTGGCAGGAA
CCGCTGCCGT CTGTGGCCAA TCTGCGAGCG ACCCAGCAGC GGCTGGAAAA CCGCCTCGCT
GCCTATGCAA CCTGCCGCGA TGGCCTGCAG GTCTGGGCGG CCCTCGGTGT GGCCCAACCG
GAAGCCGTGC CGCTGCTCGA CCGCGACAGC CTGGTCGCCC TCAAGGAAGG ATTGCCGACA
TGA
 
Protein sequence
MNPSLAKHQS WFEATARKRV AGLLDAGSFN EILPPAASMP SPHLAQLDLP GAFDDGVVVG 
TGQLSGKPIY VIAQEGQFMG GAVGEIHGAK IVGLLRRAVA EKPAAVLFLI DSGGVRLHEA
NAGLIAISEI MRAVLDARAA GVPVIALVGG SCGAFGGMGI VAKLCSAILI SEEGRLALSG
PEVIETVAGV EEFDSKDRAL VWRVTGGKHR YLMGDCAALV EDDIAAFRAG ASEFVATWQE
PLPSVANLRA TQQRLENRLA AYATCRDGLQ VWAALGVAQP EAVPLLDRDS LVALKEGLPT