Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3959 |
Symbol | |
ID | 3567458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 4255760 |
End bp | 4256920 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637682432 |
Product | integrase catalytic subunit |
Protein accession | YP_287156 |
Protein GI | 71909569 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAGA GACCCCGAAT CTATTACACG GATAGCCAGA AGGCGCTGAT GTGGGAACGC TGGCGCAAGG GCGATTCGCT TCAAAAAATC GCCCAGTTAT TTGATCGAAA CCACTCATCG GTTCAGGGAG TCCTGGCCGA GACAGGTGGC ATTCCACCGG CACCCCGATG TCGCTCGAAA CGTTCGCTCA CGCTTGCTGA ACGGGAGGAG ATTTCCCGAG GCTTGGTGGC GGGGCTTTCA ATCCGTGTGC TTGCTGCGCA ATTGGGACGA GCACCGTCCA CCGTCAGTCG TGAAGTCAAA CGTAATGGTG GCCGTGAATG CTACCGAGCA ACTCAGGCCG ACCAGGCAAC CTGGACTCGG GCGCTTCGCC CCAAGCCTTG CAAACTGACT GAGAACCCTG GGCTGGCGCA TATAGTGGCG AACAAGCTGC AGTCGCTGTG GTCACCAGAA CAGATTGCTG GCTGGCTCAA GCGGACCAAC CCAGACAATG CGAGCAATCA GGTGTCACAC GAGACAATCT ATCGCACCCT CTATATTCAA ACCCGAGGCG CTCTGAAGAA AGAGTTGTTG GCGTATTTGC GGCGGACGCG AGCCATGCGC CGCTCTCGCC ATCACACACA AAAGACTGCC GATCACGGCC GAATCGTCGA TGCTGTGTCA ATCAGCGAAC GGCCGGCCAC GGCTGATGAT CGAGCGGTGC CGGGGCACTG GGAAGGGGAT CTGCTGTGCG GCAGCAAGAA CAGTCAGATT GCAACGCTCG TCGAACGTCA GTCGCGCTAC CTGATGCTGG TCAAGCTCTC CGGCAAAGAC ACCGGGACCG TCACCAACGC CCTGATCAAA AACGCTCGTA AGTTGCCGCA AGACCTTTAC AAATCGCTCA CCTGGGACCG GGGCAAGGAA ATGGCTGGCC ATAAGCGATT CACGCTGGCG ACGGATATTC AAGTCTATTT CTGCGATCCC CATCACCCTT GGCAACGTGG AACGAATGAG AATACAAATG GCCTGTTGCG CCAGTATTTC CCAAAGGGAA TTGACCTGTC CCCCTATTCG CAAGCGAAGC TGAGTGCCAT TGCCCGAAAA CTGAATGAGC GCCCACGGAA AACACTAAAC TACGAAACAC CGGCACAACG TTTTTACCAA ACCGTTGCAT CCACCGGTTG A
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Protein sequence | MKQRPRIYYT DSQKALMWER WRKGDSLQKI AQLFDRNHSS VQGVLAETGG IPPAPRCRSK RSLTLAEREE ISRGLVAGLS IRVLAAQLGR APSTVSREVK RNGGRECYRA TQADQATWTR ALRPKPCKLT ENPGLAHIVA NKLQSLWSPE QIAGWLKRTN PDNASNQVSH ETIYRTLYIQ TRGALKKELL AYLRRTRAMR RSRHHTQKTA DHGRIVDAVS ISERPATADD RAVPGHWEGD LLCGSKNSQI ATLVERQSRY LMLVKLSGKD TGTVTNALIK NARKLPQDLY KSLTWDRGKE MAGHKRFTLA TDIQVYFCDP HHPWQRGTNE NTNGLLRQYF PKGIDLSPYS QAKLSAIARK LNERPRKTLN YETPAQRFYQ TVASTG
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