| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3947 |
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| Symbol | |
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| ID | 3567485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4244938 |
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| End bp | 4245402 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637682421 |
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| Product | nickel responsive regulator |
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| Protein accession | YP_287145 |
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| Protein GI | 71909558 |
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| COG category | [K] Transcription |
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| COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
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| TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
| Num covering plasmid clones | 70 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGTT TCACCATTTC GCTGGACGAG GATTTGGCCA AACAATTCGA TCAACTGATC
GCCGCCCGCG GCTACAGCAA CCGCTCGGAA GCCGTGCGTG ACCTGATCCG CGGTGCCATC
GAAAGCGACC GTCAGCGTGA AACGCCTTCC GGCCATTGCG TCGGCAACCT GTCCTACGTT
TACAACCACC ACGAACGCGA ACTGGCCGAA CGCCTGACCG GCCTGCAGCA TGATCACCAT
GACCTGACCG TGGCCGCCAT GCACAGCCAT CTCGATCACG ACAACTGCCT GGAGTCAGTG
ATCCTGAAAG GCTCGACTGC CGATGTCCGC CGATTTGCCG ATGCCCTGAT GGCCGAGCGA
GGCGTTCGTC ACGGCAAGCT GAACCTGATC GCGCTGGAAG CGGAACATCA TCACGCCCAT
GACGAACACG GTGAAGCCCA TGTCCATTAC CGTCCCGCCC GCTGA
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| Protein sequence | MERFTISLDE DLAKQFDQLI AARGYSNRSE AVRDLIRGAI ESDRQRETPS GHCVGNLSYV
YNHHERELAE RLTGLQHDHH DLTVAAMHSH LDHDNCLESV ILKGSTADVR RFADALMAER
GVRHGKLNLI ALEAEHHHAH DEHGEAHVHY RPAR
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