| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3940 |
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| Symbol | |
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| ID | 3567478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4235537 |
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| End bp | 4235962 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637682414 |
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| Product | 3-dehydroquinate dehydratase |
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| Protein accession | YP_287138 |
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| Protein GI | 71909551 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
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| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00000000000000739911 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACGGGC CGAATCTGAA CCTGCTTGGC ACCCGTGAGC CGGAGCATTA TGGCCGGGTT
ACCCTGTCGG ATATCAACAT GGCGCTGGCC CGCATGGCCG AAGGTGCCGG CGTTGAGCTG
GAATCCTTCC AGAGCAATCA TGAAGGTGCG CTGATCGAGC GCATCCATGC GGCTCGTGAA
CAGGGTGTCC GTACCATCAT TATTAATCCT GCGGCTTATA CGCATACCAG CGTGGCGCTG
CGCGATGCTT TGGCGGCGGT AGCGATTCCG TTCGTCGAGG TACATCTTTC CAATGTGCAT
GCCCGGGAGC CATTCCGGCA TCACTCGTAT TTTTCGGACC TGGCTGTCGG CGTCATCTGC
GGGCTGGGTC ATGAGGGCTA CCTGTTGGCC CTCGAATACA TGCTTAACAA GCTTAATATT
GAATAG
|
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| Protein sequence | MHGPNLNLLG TREPEHYGRV TLSDINMALA RMAEGAGVEL ESFQSNHEGA LIERIHAARE
QGVRTIIINP AAYTHTSVAL RDALAAVAIP FVEVHLSNVH AREPFRHHSY FSDLAVGVIC
GLGHEGYLLA LEYMLNKLNI E
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