| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3926 |
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| Symbol | |
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| ID | 3567657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 4221189 |
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| End bp | 4222514 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637682400 |
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| Product | Type I secretion outer membrane protein, TolC |
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| Protein accession | YP_287124 |
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| Protein GI | 71909537 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TCGCTTGGCT GATCGTTTCG CCGCTGCTCG CCTCCCCACT CTTTGCCGCC
GACCTGATGC AGGTTTATCG CGACGCGCAG GACAACGATC CGACCTTTGC CACCGCCCGG
GCAACGCTCG ATGCCGGACG TGAAAAGTCG CCACAGGCAC GCGCCGGGTT ATTACCCAGC
CTGACCTTGT CCGGCAACAC CGTGTGGAAC GAGAATGAAC TCTCGGCCCA CAACGGACCG
ACCATCGCCA AGCCGCACTA CAACTCCAAC GGTTACCAAC TGACGCTCAG CCAGCCGCTG
TTCCGCTGGC AAAACTGGGT TTCCTACGAC CAATCGAAGC TGCAGGTTGC CCAGGCTGAA
GCCAATTTCG TTCAGGCCCG ACAAGACCTG ATCCTGCGTG TCTCACAAGC CTATTTCGAC
GTGGTTTATG CCGTCGAAAA CCTGAAGGCA GTTGGCGCCA ACAAGGCCGC CATTGCCCAG
CAACTCGAGT CAGCCAAGAA GAATTTCGAA GTCGGCACCG CGACCATCAC CGATACGCAC
GAGGCACAAG CCCGTTACGA TCTGGCGATC GCTCAGGAAA TTGCCGCCGA AAGCGATTAT
GAAATCCGCC AACGCGCCTT GCAGGCCATC ATCGGCAAAG AGCCGGGGCC ACTGGCGACG
ACGCGCAAGG ATGCCGAGCT ATCGCCGCCG CAGCCAAACG ACATGAAACA GTGGGTGGCA
GCCGCCGAAA AGGACAGCAT CACGGTTCAG GTGCAACAGG CCAATGCCGA CATCGCAGCC
CGTGAAGTCG ACAAACAACG GGCTGGACAC TATCCGACCG TAGACCTGGT CGCCAACCAG
GGCTATTCAA AGAACTACGC CTCGACTTTC GGCGTCTATG ACACCGATTT CAAGAACGTC
GGCGTTCAAG TCAATATTCC GCTGTTTCAG GGCGGCCTGA CCGTTTCGCG TCAACGTGAA
GCGGCCGCCA ATCGTGGCGC GGCGCAATCC GCACTCGAAA CGGCTCGCCG CGGTGCCGCA
TTGTCTGCGC AGCAATACTA TCTCGGCGTA AGCAATGGGC TGGCCCAGGT CAGAGCCCTG
AAAGCCGCGT TAATCTCATC ACAATCAGCA CTGGAATCGA ACAAGCTGGG CTACGAAGTC
GGCGTTCGCA TCAACATCGA CGTGCTGAAC GCCGAAAACC AGGTCTACGT CACGCGACGC
GATCTGGCCA AAGCCACACT GGATACGCTG ATGTCGCAAC TGCGTCTGAA GGCAGCAACC
GGCTCATTGG GCGAAGATGA TGTCGCCCAG ATCAACGCCC TGCTCGACCC GTCCACCGCT
CAATAA
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| Protein sequence | MKKLAWLIVS PLLASPLFAA DLMQVYRDAQ DNDPTFATAR ATLDAGREKS PQARAGLLPS
LTLSGNTVWN ENELSAHNGP TIAKPHYNSN GYQLTLSQPL FRWQNWVSYD QSKLQVAQAE
ANFVQARQDL ILRVSQAYFD VVYAVENLKA VGANKAAIAQ QLESAKKNFE VGTATITDTH
EAQARYDLAI AQEIAAESDY EIRQRALQAI IGKEPGPLAT TRKDAELSPP QPNDMKQWVA
AAEKDSITVQ VQQANADIAA REVDKQRAGH YPTVDLVANQ GYSKNYASTF GVYDTDFKNV
GVQVNIPLFQ GGLTVSRQRE AAANRGAAQS ALETARRGAA LSAQQYYLGV SNGLAQVRAL
KAALISSQSA LESNKLGYEV GVRINIDVLN AENQVYVTRR DLAKATLDTL MSQLRLKAAT
GSLGEDDVAQ INALLDPSTA Q
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