Gene Daro_3923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3923 
Symbol 
ID3567654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4219500 
End bp4220144 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content54% 
IMG OID637682397 
ProductTetR family transcriptional regulator 
Protein accessionYP_287121 
Protein GI71909534 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones73 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCAA TACCCGCCCC CCGCAAACGT CGCAAGGAAG ACCGCCCATC GGAACTTCTT 
GGTGCAGCCC TCCATTTGTT TGTTGAAAAA GGCTTCACCG CGACCCGACT GGAAGATGTC
GCTGCCAAGG CGGGGGTTTC GAAGGGTACG CTGTATCTCT ATTACGAGAA CAAGGAAGCC
TTGTTCAAGG CAGTGATCCA GGAAGGTGTA ATTCCGATCA TCGCCGAAAA TGAAGCCATC
GCGGCCAAGC ACACGAGCAG CAGCTTCGAT CTGCTGGAAA AACTGCTCGA TAACTGGTGG
ACGAAAATCG GCCAGACGGC TTTTGCCGGC ATTCCGAAAT TGATGGTGGC CGAGGCCAGG
AACTTTCCCG AGCTGGCGAC TTTCTATTAC GAAAATGTCA TCAACCGCAG CCGGGCGCTG
GTCGGATCAA CACTGCGCCG CGGCATGAAC AGCGGCGAAT TCCGGCCGAT GGACGTTGAA
ACAACGATCG ACGTGCTCAT TGCACCGATC CTGATGCTGC TGATCTGGCG TTTTTCAATG
AACTGCTGCC AAGGCAGCCA AACCGATCCG CAGCAGTATC TGCAGATCCA TATGGACATA
CTGCGGCAAG GTTTGCGCAG GCTGGAAAAA GAGAGTCAGG TATAA
 
Protein sequence
MSAIPAPRKR RKEDRPSELL GAALHLFVEK GFTATRLEDV AAKAGVSKGT LYLYYENKEA 
LFKAVIQEGV IPIIAENEAI AAKHTSSSFD LLEKLLDNWW TKIGQTAFAG IPKLMVAEAR
NFPELATFYY ENVINRSRAL VGSTLRRGMN SGEFRPMDVE TTIDVLIAPI LMLLIWRFSM
NCCQGSQTDP QQYLQIHMDI LRQGLRRLEK ESQV