Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3916 |
Symbol | |
ID | 3567704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 4210135 |
End bp | 4211343 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637682390 |
Product | hypothetical protein |
Protein accession | YP_287114 |
Protein GI | 71909527 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTTTGA ACGCACTCCT GCTCGCCCTG CGCGAGATTC GCCGCAACCT GCTGCGCTCC TTCCTGACCG TGCTCGGCAT CGTCATCGGC GTCGGCGCGG TGATCACCAT GGTGACGCTG GGCAACGGCG CGACCAAGAT GGTTTCCGAT CAGATTGCCA GCCTCGGCAG CAACCTGCTG ATGGTCATGC CCGGCCAGCG CCTCGGCCCG GGGCGCGACA GTGCCGGCGC GCCGAAATTC AAGATCGCCG ATATCGAGGC CATCCAGCAA CAGGTCAATG GCCTCAAGGC TGTGGCGCCC GTCGTCGGCA GCCCCGTAAC GCTGGTCGTC GGCACGCAGA ACTGGTCGTC GACGGTGAGC GGAACAACCA ACGACTACTT TATCTCCGGC AACTGGAAAA TCGCCGCCGG GCGGCAGTTC ACCGATGACG AGGAACGCGC CGGCAAGGCC GTTTGCGTGG TCGGTAATAC CGTCAAAAAG GAGCTGTTCG GCGCCGGCAA TCCAGTCGGC AGCAGCATCC GCGTCAAGAC CTTCGACTGC GAGGTGATCG GCCTGCTCGT CGCCAAGGGC CAGGGCGGCA TGGGCCAGGA CCAGGACGAC ACGGTGCTGA TGCCGCTGCG CACCACGCAA CGCCGGCTGA CCGGCTCGCT CGATATCGGC AATGTCATGG TCTCGCTCAA GGACGGCACT GACGCGACCG TCGCCATCGC CCAGCTGCGC AGCCTGCTGC GCGAACGCCG CAAGCTGGCC GAGAACGCCG ACGACAATTT CAACGTGATG GACACCAAGC AGATCGCCGA AACGCTCTCC GGCACCATCG GCACGATGAC CGCGCTGCTC GGCGCGGTGG CCGCCGTCAG CCTGCTCGTC GGTGGCATCG GCATCATGAA CATCATGCTG GTGTCGGTCA CCGAACGGAC GCGGGAAATC GGCATCCGGC TGGCCATCGG GGCGCTGGAA AACGAGGTGC TCTGGCAATT CCTGATCGAA GCCGTGGTGC TCTCCGCCTG CGGTGGGCTG GTCGGCGTGG GGCTGGCTTT TGTCGCCTGC CTCGGGCTGT CGTCGCTGAT GCACATCCCT TTTATGTTCA ACCCGGCCAT CAACCTGACG GCCTTTGGCT TCTCGGCAGC GATTGGAGTG ATTTTCGGCT ACGTGCCGGC GCGCCGGGCG GCGCAACTTG ACCCGATCGA AGCGTTGCGG CACGAGTAG
|
Protein sequence | MILNALLLAL REIRRNLLRS FLTVLGIVIG VGAVITMVTL GNGATKMVSD QIASLGSNLL MVMPGQRLGP GRDSAGAPKF KIADIEAIQQ QVNGLKAVAP VVGSPVTLVV GTQNWSSTVS GTTNDYFISG NWKIAAGRQF TDDEERAGKA VCVVGNTVKK ELFGAGNPVG SSIRVKTFDC EVIGLLVAKG QGGMGQDQDD TVLMPLRTTQ RRLTGSLDIG NVMVSLKDGT DATVAIAQLR SLLRERRKLA ENADDNFNVM DTKQIAETLS GTIGTMTALL GAVAAVSLLV GGIGIMNIML VSVTERTREI GIRLAIGALE NEVLWQFLIE AVVLSACGGL VGVGLAFVAC LGLSSLMHIP FMFNPAINLT AFGFSAAIGV IFGYVPARRA AQLDPIEALR HE
|
| |