Gene Daro_3916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3916 
Symbol 
ID3567704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4210135 
End bp4211343 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content65% 
IMG OID637682390 
Producthypothetical protein 
Protein accessionYP_287114 
Protein GI71909527 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTGA ACGCACTCCT GCTCGCCCTG CGCGAGATTC GCCGCAACCT GCTGCGCTCC 
TTCCTGACCG TGCTCGGCAT CGTCATCGGC GTCGGCGCGG TGATCACCAT GGTGACGCTG
GGCAACGGCG CGACCAAGAT GGTTTCCGAT CAGATTGCCA GCCTCGGCAG CAACCTGCTG
ATGGTCATGC CCGGCCAGCG CCTCGGCCCG GGGCGCGACA GTGCCGGCGC GCCGAAATTC
AAGATCGCCG ATATCGAGGC CATCCAGCAA CAGGTCAATG GCCTCAAGGC TGTGGCGCCC
GTCGTCGGCA GCCCCGTAAC GCTGGTCGTC GGCACGCAGA ACTGGTCGTC GACGGTGAGC
GGAACAACCA ACGACTACTT TATCTCCGGC AACTGGAAAA TCGCCGCCGG GCGGCAGTTC
ACCGATGACG AGGAACGCGC CGGCAAGGCC GTTTGCGTGG TCGGTAATAC CGTCAAAAAG
GAGCTGTTCG GCGCCGGCAA TCCAGTCGGC AGCAGCATCC GCGTCAAGAC CTTCGACTGC
GAGGTGATCG GCCTGCTCGT CGCCAAGGGC CAGGGCGGCA TGGGCCAGGA CCAGGACGAC
ACGGTGCTGA TGCCGCTGCG CACCACGCAA CGCCGGCTGA CCGGCTCGCT CGATATCGGC
AATGTCATGG TCTCGCTCAA GGACGGCACT GACGCGACCG TCGCCATCGC CCAGCTGCGC
AGCCTGCTGC GCGAACGCCG CAAGCTGGCC GAGAACGCCG ACGACAATTT CAACGTGATG
GACACCAAGC AGATCGCCGA AACGCTCTCC GGCACCATCG GCACGATGAC CGCGCTGCTC
GGCGCGGTGG CCGCCGTCAG CCTGCTCGTC GGTGGCATCG GCATCATGAA CATCATGCTG
GTGTCGGTCA CCGAACGGAC GCGGGAAATC GGCATCCGGC TGGCCATCGG GGCGCTGGAA
AACGAGGTGC TCTGGCAATT CCTGATCGAA GCCGTGGTGC TCTCCGCCTG CGGTGGGCTG
GTCGGCGTGG GGCTGGCTTT TGTCGCCTGC CTCGGGCTGT CGTCGCTGAT GCACATCCCT
TTTATGTTCA ACCCGGCCAT CAACCTGACG GCCTTTGGCT TCTCGGCAGC GATTGGAGTG
ATTTTCGGCT ACGTGCCGGC GCGCCGGGCG GCGCAACTTG ACCCGATCGA AGCGTTGCGG
CACGAGTAG
 
Protein sequence
MILNALLLAL REIRRNLLRS FLTVLGIVIG VGAVITMVTL GNGATKMVSD QIASLGSNLL 
MVMPGQRLGP GRDSAGAPKF KIADIEAIQQ QVNGLKAVAP VVGSPVTLVV GTQNWSSTVS
GTTNDYFISG NWKIAAGRQF TDDEERAGKA VCVVGNTVKK ELFGAGNPVG SSIRVKTFDC
EVIGLLVAKG QGGMGQDQDD TVLMPLRTTQ RRLTGSLDIG NVMVSLKDGT DATVAIAQLR
SLLRERRKLA ENADDNFNVM DTKQIAETLS GTIGTMTALL GAVAAVSLLV GGIGIMNIML
VSVTERTREI GIRLAIGALE NEVLWQFLIE AVVLSACGGL VGVGLAFVAC LGLSSLMHIP
FMFNPAINLT AFGFSAAIGV IFGYVPARRA AQLDPIEALR HE