| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3904 |
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| Symbol | |
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| ID | 3567692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 4198140 |
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| End bp | 4200350 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637682378 |
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| Product | cyclic nucleotide-binding:Sulfate transporter/antisigma-factor antagonist STAS:xanthine/uracil/vitamin C permease:sulphate transporter |
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| Protein accession | YP_287102 |
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| Protein GI | 71909515 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily)
[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGATG TCTTCAAGAA GCTCTACCAG AGCGGTGACT TCTGGGGCGG CCTGGCGGCC
ATGCTCGTCG CCCTGCCGGC GGCCATCGCC TTCGGTGTCA CGATCTACTC GGCCATCGCC
CCCAGCCATG CGGCGCTTGG CGCACTGGCT GGAATCATCG GCGCCTCGGT CATCGGCCTG
ATCGCCTCCA CCCTTGGCGG CACCGACCGT CTGATCAGCG CCCCCTGCGC CCCGGCCGCC
GCCTTGCTTT CGGCTTTCGC CATCGAACTC GTCGCCCAGG GCATACCGGG TGGCAACATC
ATCTTGTTGC TGCTGATGCT CGGCGTGCTC GCCGGCATGT TTCAGGTGCT CTTCGGTTTT
GTCGGCATTG GCCGACTGAT CAAATACATC CCCTACCCGG TGGTCAGTGG CTACCTGACC
GGTGTTGGCC TGATCATCAT CGGCAGCCAG ATTGGCAAAC TGCTCGGCAC GCCGACCGGC
GCCCGCTGGT ACGAAGTGCT TTACACCCCA TCGTTATGGG ACTGGCGAGC GCTGGCCGTC
GGCCTGACAA CGATGCTCGT CATGTGGCTC AGCCCAGGTC TGACCCGACG CCTGCCGGCC
ACCATCCTCG GCATCGCCGC CGGAATTGCC TGCTATTTCG CCCTGGCGTC GCAAGACGAG
AGCCTGCTCC AACTCGCAGC CAACAATCTT GTCATCGGCC CCTTGGGCGC CAGCGGCGAA
GGCTACATCC AGTCGATCAC CGCCCGCTGG AACGAGATCG GCGATCTGCG ACTGGGCCAG
GTTGCCGCGC TGCTCGGCAA TGCCTTGACC CTGGCCGTGC TCCTGTCGAT CGACACCCTG
AAAACCTGCG TTGTCCTCGA TCAACTGACC CGCTCGCAAC ACAACCCGAA CCGCGAGCTG
GTCGCCCAGG GCATTGCCAA TATCGCCTCG TCGTCGGTCG GTGGCATTCC CGGCGCCGGC
ACGATGGGCG CCACGCTGGT CAATCTGTCC AGCGGGGCGA TGACTCGCGC TTCGGGCCTG
GTCGAAGGCA TCTCGGCCCT TGTCTTCGCG CTATTGTTGA GCAGCTTCAT TGCATGGATT
CCGGTTGCCG CACTGGCCGG CATTCTGATC GTGGTCGGTA TCCGGATGAT CGACCGCGGA
CCGCTGCGCT TTGTTCAGTC TTCGGCGACG GTTTTCGATT TCGGCGTTGT CGTCACCGTC
GTCGTCGTCG CTCTGACCAT TGGCCTGATT GCCGCTTCGG CTACCGGCGT CGCGCTCTCC
ATCATCCTTT TTCTGCGCGA GCAGATCGGC GGCTCCGTCG TCCGCCACAA GTTCTACGTC
AACCAGATGT CGTCGAGCTG GCATCGCCCT GAAGCCGAGA CCCGTATTCT CGAAAAGAAG
GGGGACCAGG CGGTGATCTT CGAACTGCAG GGCAGCCTGT TTTTTGGCAC CACCCAGCAG
CTTTATAGTC AGCTGGAGCC TGAGCTAAAG AGCCGAAATT TCGTGATCCT CGACATGAAG
CGCATTCAGT CGGTGGATGT CACGGCAGCC CACCTGCTCA GCCAGGTTCG AGATTCACTG
GCTGAACGTA ACGCCCTGCT GATCCTGTCC AACGTCCGGG AAAACCTGCC GAATAATCGT
AATCTGCGCG AATTTCTGGC CCAGACCGGC GTCACCGACA TCCCGGAAAG CGTCCGCCTG
TTCGACGAAC TGGATAGCGC CATCGAATGG GTTGAGGATC GCCTGCTCGG CAGCCGAGAA
GAACAGGCCA GCCCGGAAAC CGAAACGCCA CTAGAGCTCC AGGAGATGGA GTTATTCAAG
CACCGCAAGG ACGAAACCTT GGCTGATCTG GAAAAATGTC TGGTCAAACG CCACTACGCC
GCCGGCGATG TCGTCTATTC GCAAGGCGAA GCGGGAGATG AGATTTACCT GATCCGGTAC
GGCTCGGTAA AGATTTTTGC CCCGTTGGGC GGGGGCCGAA CCAGACATGT GGCGACCTTT
GGCCGCGGAG ACTTTTTTGG CGGCCTGGCG TTTCTCGATG GCTTGCCCCG AGGCAACGAT
GCGGTCGCCG CCAGCGACAC GGAGTTTTTC ATCCTGTCCC AGGAGCAGTT CAATATCCTC
TCCGAGGAGC ACAAGAAACT GGCACTGACC CTGCTTCAGG CACTGGCCCG CTCCCTCGCT
CTGCGCCTGC GCCACGCCGA TACCGAAAAC GCCATGCGCC AAGAATACTA G
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| Protein sequence | MQDVFKKLYQ SGDFWGGLAA MLVALPAAIA FGVTIYSAIA PSHAALGALA GIIGASVIGL
IASTLGGTDR LISAPCAPAA ALLSAFAIEL VAQGIPGGNI ILLLLMLGVL AGMFQVLFGF
VGIGRLIKYI PYPVVSGYLT GVGLIIIGSQ IGKLLGTPTG ARWYEVLYTP SLWDWRALAV
GLTTMLVMWL SPGLTRRLPA TILGIAAGIA CYFALASQDE SLLQLAANNL VIGPLGASGE
GYIQSITARW NEIGDLRLGQ VAALLGNALT LAVLLSIDTL KTCVVLDQLT RSQHNPNREL
VAQGIANIAS SSVGGIPGAG TMGATLVNLS SGAMTRASGL VEGISALVFA LLLSSFIAWI
PVAALAGILI VVGIRMIDRG PLRFVQSSAT VFDFGVVVTV VVVALTIGLI AASATGVALS
IILFLREQIG GSVVRHKFYV NQMSSSWHRP EAETRILEKK GDQAVIFELQ GSLFFGTTQQ
LYSQLEPELK SRNFVILDMK RIQSVDVTAA HLLSQVRDSL AERNALLILS NVRENLPNNR
NLREFLAQTG VTDIPESVRL FDELDSAIEW VEDRLLGSRE EQASPETETP LELQEMELFK
HRKDETLADL EKCLVKRHYA AGDVVYSQGE AGDEIYLIRY GSVKIFAPLG GGRTRHVATF
GRGDFFGGLA FLDGLPRGND AVAASDTEFF ILSQEQFNIL SEEHKKLALT LLQALARSLA
LRLRHADTEN AMRQEY
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