Gene Daro_3895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3895 
Symbol 
ID3567740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4185681 
End bp4191281 
Gene Length5601 bp 
Protein Length1866 aa 
Translation table11 
GC content59% 
IMG OID637682369 
Productresponse regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt 
Protein accessionYP_287093 
Protein GI71909506 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGG CAACTGAATT TGATTTGGGC CCCCTGACCT GGGTCAAGGG CGAGATTGAT 
CTGGCGCTGG AGCGGGCGGA GGAAGCCTTT GGACTTCATG TCTCGGGTGC TGATGACACA
CAGCTCAAGT TTTGCCGCAC CCATGTTCAC CAAGTGCATG GTGCATTGGC AATTGTCGGC
CTGGACGGCA TAACGCAGGT CACCGAGTCG CTGGAGTCGT TGCTCTCGGC CATGGAAGAG
GGGCGCCTGG CTTCTGACGA TGCCGCCGTC GCGGCCGTGC ATCAGGCGCT GGCCGGCATA
CGCCTCTATC TCGACGAACT GATGGCTGGG GAACCCAATC AGCCGCTCCG TTTGTTGCCT
GTCTACCTTG CCTTGGCCAA GGTGCGTGGC TTGCCGACGG CGCGGGCTAG CGATTTGTTT
TTCCCTGATC TTTCCTTGCG CCCGCCAAAG CGGGTTGCTG CCAGCAAGCG CTTGGGGCAG
GAAGAGCTGC GCCAAGTATT GAAAGCAGAG CGAGGCCTAT ACCAAAAAGG CTTGCTCCGC
TGGCTGACCA AGCCAGCCGA GGCCGAAGCC GGCCGTCAGA TGATGCTGGA TGCCTTGACG
GGTATCGAGG CTACTCAGGA AACTCCGGCG GCCCGTTCAT TCTGGTGGAC CGCACAGGCT
TTTATTGAGG CCTTGAAGGA TCCGTCAGTC AGTGCCGATG GCTCGGTCCG TCAAGTGAGT
GCCCGCATCG ACCTGCAGAT TCGCCGCTTG CTAGAGGGCT CGAACAGCCT GGCCGAGCGT
CTGATGCGTG AAGCGCTTTA TCATGTTGCC CAAGCACCAA CCGGGTTGAG CAACGTTGTT
TCACAGGTCC AGTCAACCTT CGGTTTGCCA TCACAGCTTC CCTCTACCGC CGAGACGGCG
ACGCTACCGC AGGATGCCGT GCTGCGGCGT CTGCGTGAGG TGCTTGGCAG TGCTGAGGAT
ATTTGGAACA AGGTCTGCGC ATCGGGTAGC CCTGCGATGC TGCCTGCCTT CGCCGAACAG
GCGCGTAGCG TTGCGGCGCT GACCGAAGAA ATTGCAAATA CTGACCTGAA GCGCCTCGGC
CAGGGGCTGG GGGCAATTGC TAACTGGTTG ACCGAAGATC CTGCTCACCA CTCCGATACG
GTGGCGATGG AGGTGGCAAC CGCGATCCTG CTTTTGCAGA ACGCCCAGGA GAGCTTCAAG
CGTCTGGGAA CCGATTTCGC CCAACAGGTC GATCTGATGG TTGCCCGGCT TTATGCTTGC
ATTGCAGGCC GACCGGCGAC CGATGAAGCG CTGCCCTTGC TCGACGAAAT GACCCGGCGC
GCTCAGGAAA AGCTGCTGAT TAGCCAGGTT GCCAGGGAAA TCCAGAACAA TCTGGCGCAG
GTCGAGCAGT CGCTCGATGC CTTCTTCAGG GATCCCTCCG CTGAACACGA TCTGGCGCCA
CTTGATGGTC CGCTGAAACA GATTGCCGGC GCATTGGCCA TGCTCGGTCA CATGGGGGCT
ACAGCCAGCG TCAAGGATTG CGGAGAACAA ATTCACCGCT TTGCCGAGCC CGGTTCAAGC
CATTCACCGG AAGATTTCGA GAAGATTGCC CAGCAGCTGT CTATTCTCGG CTTTTTTGTT
GATGCGCTAC CCAGTGGTGA GACTGATTTT GAGGCCTTCG TCAGCCGGAT TCAGGGTACC
AAGACGATTG ATGAGGATGA AGAGGAGACT TCCTCGGAAG CCGAACCGGC ATCGAGTGTT
GAAGCTGAGC TGGCGCAACA GGCACGCGAC ACCCACGCCC TGGTCGCTGC GCTGAAGGAG
GCGCCGGCAG ATGAGCGTCT GCAGCAGGAG CTCAAGCAAA ATCTTCAAGC GCTAAAACAG
GATGCTGATC TCGTTGCGAA TCACGAGCTG GGAGAAACTG CCAAGGCGGC ACTTGAGGCT
TTGAAGACTG GCGATCTGGC CGGTGAAAGC GGCGATGCCG CGCTCGCCGC CCTGATGCCA
CAGCAACCAG AGGTGACGGC ACCGTCGGCT GAAACGCTGC AGCTTGCCGA GTCAACGCAT
GAAGCAATTG ATGCCGAACT GCTGTCCATC TTTCTTGAGG AGGCCAACGA AGTTTTGGTC
ACGATGAGCG ATCAGCAGGC ATTGCTCGTT GCTGATCCGC ACAACTTGGA AGCATTGACG
ACGATTCGTC GTTCCACACA TACGCTCAAG GGCAGTGGAC GCATGGTCGG TTTGAACGAC
CTGGGCGAAG CCGCGTGGGA GCTTGAGCAG ACATTGAATA TCTGGTTGCG CCAAGATCAG
TGGGCAACGC CGGAACTGAT GCAGATGATT CAGGGCGAGC ACGCTTTGTT CTCCGCCTGG
GTGCATTATC TTGAGTCCGG TGAGGGTGTA GCGCCCGACC CTTCTGCCCT GGTCGCGCTG
GCCGGCCGCT TGCGTGGTCT GGAGCCGCCT CCCGTCGCCG TGGCGCCGCT AGAGGTTGAA
CCGGAGGTCG CTGAGCAAAT TCAATTGCCG GAGCCGGAGC CGGAGCCGGA GGCTGAAGCT
GAAGCTGAAG CCGAGATCAG CGTGTTCGAG GCGGAGCAGT TTGTTGCGCC TGAGCCGACT
GTTGCCGAAG AGTTACCCGT GGTCATCGAG TTCGAAGCTG TTCCAGAAGC AGAGCACACT
TCGCTGACCC CGGCGACTGA GCCGGAACCC GAAGCCGGCC TGCTCGAAGT GGAGCAGTTC
GATGCTACCG AGTTGCCTGT TGTCGAGGAG TTGCCTGAGG TCATAGAACT CGTGGCGGTT
CCGGAAGAGG AAGCGCTTCC GCTGCAACTC GAACCAGCGG CTGAAGTCGT GTCGCCAAGC
ATGCCTTCGA TGGTGACGGC CTCGCCGACC TTGTACGATA TTTTCCGCGA TGAAGCGCGT
GGTTATCTGC AGACCTTGGT CGACAGCTAC GCGGTGCTCG ATGCCAATCC GTCCGGGCCG
ACGACTTTCG AAATGACTCG TGCTGCCCAT ACATTGGGCG GTATTGCAGC AACTGTGGGC
CTGATGCCTC TGCATCGACT GGCCCTCGCC CTTGAGCACG CCTTGTTGCG CCGGGATGGT
TCAGCTCATC CGGAGAGCAT CGAGGGGCTG GAAACCGTGC GGCAGAGCAT CATTACCCTC
GAAGGGATGT TCGATGCATT GGCCCAGCAG CGTGCTCCGG ACGAACAGCA GCAACTGATT
TCGGCGCTGG ATGACATTTT CCACCCTGCC CCCGTTGAGG AGTCGCTGCC GCCGACAAGC
GCCGAGATTA TTCAACTGCC GGGTACGCAG AGTACGGTTG CCGAGATCGA GCCGGAACCT
TCCGCACAGG TGCCCGTTCC GGCCTTGCCG CAACTGACTG ATGAATTCGA CGAACAGCTA
CTGCCCATCT TCCTCGAAGA GGCGGTTGAT CTGACGCGTG ACCTGATGGC GCAACTGCGT
ACCTGGCGTG GAGACCCGGC TGGTACCGCA GCGCCAAAGG CGATTGCCCG TTTGATGCAT
ACCTTCAAAG GTAGTGCGCG GATGGCGGGG GCGATGAATC TCGGTGAAGT GACGCACATG
CTCGAAGCGC GGGTCGAAGA GGCCATGCGG GCAGGGCAGG CGACACCGGC ATTCATTGAT
GAAATTGAAA CCGGATGCGA TACGCTGGTG CAGGCGGTTG AACGCCTGCG TGCCGGGCCA
CAGGAGCCTG AGGTTACGGA AGTTCCCGCG GTTGAGGGCG AAACGGCGAC GCCTGTTGTC
GTACAGCCAC TTCATGTCGA AGCGGAGCCA GAAACCGATG TCAGCGGGCA ACGCGCCACG
CTGCGTGTTC GTGCCGACCT GATTGATCGA TTGGTTAATG AGGCGGGTGA GTTGTCCATT
GCCCGGACCC GGATCGAAGG AGAAATGCGC AGTCTGAAAG GCTCGCTGCT CGAATTGACG
GAAAACGTCA TTCGTCTTCG TCGCCAGTTG CGCGACATCG AGATTCAGGC AGAGTCTCAG
ATTCAGGCTC GTGTGGCCAA CACTCCGGAA AGTGATGCCG ATTTCGATCC GCTGGAGCTT
GACCGTTTCA CCCGCTTCCA GGAACTGACG CGCTTCATGG CCGAGTCGGT CAATGACGTG
GCGACGGTTC AGCAAAACCT CTTGAAGAAT CTTGATGACG CCAACGCGGC GATTCTGGCG
CAGTCACGCC TGAATCGCAG CCTGCAGCAA GAGCTGATGG GCGTGCGCAT GCTGCCGTTT
GCCAGCCAGA CCGAGCGTCT TTATCGTATT GTCCGGCAGA CCGCCAAGGA GACCGGTAAG
CGAGCCAATC TCGATATCAT CGGTGGCCAG GTCGATATCG ACCGTTCGGT GCTCGACAAG
ATGCTGGCGC CGATCGAGCA CATGCTGCGC AATGCCGTGA CCCACGGTAT CGAAAATCGC
GATCAGCGCC TTGCTGCCGG CAAGCAGGAA GCGGGAGAAA TCGTCGTCAA GATTGCCCAG
GAAGGCAATG AAATCATTCT GTCCATGTCC GATGACGGTA AAGGGCTGGA TACGACCCGT
ATCCGCACCC GTGCCGAGGC CATGGGGCTG CTCCAGCCAG GGCAAGATGC CGACGAAGCA
ACGCTGTATG ACTTCATCTT CCAGCCGGGC TTTTCGACGG CGACCGAACT GACCCAGTTG
GCTGGCCGCG GTGTCGGCAT GGACGTTGTG AAGACGGAAG TGGCCGAACT CGGCGGGCGC
ATCGAAATTT TGTCGCAGCC CGGCCACGGC ACGACCTTCC GTCTCTACCT GCCATTGACC
CTAGCCGTGA CGCAAACCTT GTTGATCCGG GCTGGCAGCC ATCTCTACGC TGTGCCTTCA
ACGATGATCG AACAGGTCAT GGAAATGAAG GAAAAGGCGC TGGCGGTTTA CCGCGAGCAA
GGCGAAGTAA CGTGGCAAGG CAATCGTTAT CCCTTCCAGT ACCTGCCGCA TTTGCTGGGT
GATACGCAGG CGGTGCCAGA GTTGCATCGC CAATATTGGG TGCTATTGCT GCGTTCCGGT
TCGCAACGGG TAGCGATTCT GGTCGATGAA CTCAAGGGTA ACCAGGAAGT TGTCGTCAAG
AATATCGGTG TGCAGCTGGC GCGGGTCGTC GGTATTGCCG GCGCTACCGT GCTTGGCGAT
GGCAAGGTCG TGCTGATCCT GAATCCGGTG GCGCTGGCCA GCCGGGTCCC GGTAAGCGGT
GCGCCGGCTG TCGTGGCGGC CGTACCGGCG GCACCGGAGC CGGTCGCAAC GGCGGTTGAA
ATGCTGCCGA CGGTGATGGT GGTCGACGAT TCGCTGACGG TGCGCAAGAT CACGAGCCGT
TTGCTGATGC GCGAAGGCTA TCAGGTCATC CTGGCCAAGG ATGGTGTCGA TGCGCTGGAG
CAACTGATCG ACGTGATGCC GGATGTGATC CTGTCCGACA TCGAAATGCC CCGCATGGAT
GGTTTCGATC TGGTGCGCAA TATTCGCGCC GAGGAGCGTC TGCGCTCGGT GCCGATCATC
ATGATCACCT CGCGGACGGC CGACAAACAT CGCAACTACG CACTGGAAAT CGGTGCCAAC
CATTACCTTG GCAAGCCGTA CGACGAAGTT GAGTTGCTCA GTCTGATCGA CGGTTATGCC
AAGGCGAGAC GGGCGCATTA G
 
Protein sequence
MNAATEFDLG PLTWVKGEID LALERAEEAF GLHVSGADDT QLKFCRTHVH QVHGALAIVG 
LDGITQVTES LESLLSAMEE GRLASDDAAV AAVHQALAGI RLYLDELMAG EPNQPLRLLP
VYLALAKVRG LPTARASDLF FPDLSLRPPK RVAASKRLGQ EELRQVLKAE RGLYQKGLLR
WLTKPAEAEA GRQMMLDALT GIEATQETPA ARSFWWTAQA FIEALKDPSV SADGSVRQVS
ARIDLQIRRL LEGSNSLAER LMREALYHVA QAPTGLSNVV SQVQSTFGLP SQLPSTAETA
TLPQDAVLRR LREVLGSAED IWNKVCASGS PAMLPAFAEQ ARSVAALTEE IANTDLKRLG
QGLGAIANWL TEDPAHHSDT VAMEVATAIL LLQNAQESFK RLGTDFAQQV DLMVARLYAC
IAGRPATDEA LPLLDEMTRR AQEKLLISQV AREIQNNLAQ VEQSLDAFFR DPSAEHDLAP
LDGPLKQIAG ALAMLGHMGA TASVKDCGEQ IHRFAEPGSS HSPEDFEKIA QQLSILGFFV
DALPSGETDF EAFVSRIQGT KTIDEDEEET SSEAEPASSV EAELAQQARD THALVAALKE
APADERLQQE LKQNLQALKQ DADLVANHEL GETAKAALEA LKTGDLAGES GDAALAALMP
QQPEVTAPSA ETLQLAESTH EAIDAELLSI FLEEANEVLV TMSDQQALLV ADPHNLEALT
TIRRSTHTLK GSGRMVGLND LGEAAWELEQ TLNIWLRQDQ WATPELMQMI QGEHALFSAW
VHYLESGEGV APDPSALVAL AGRLRGLEPP PVAVAPLEVE PEVAEQIQLP EPEPEPEAEA
EAEAEISVFE AEQFVAPEPT VAEELPVVIE FEAVPEAEHT SLTPATEPEP EAGLLEVEQF
DATELPVVEE LPEVIELVAV PEEEALPLQL EPAAEVVSPS MPSMVTASPT LYDIFRDEAR
GYLQTLVDSY AVLDANPSGP TTFEMTRAAH TLGGIAATVG LMPLHRLALA LEHALLRRDG
SAHPESIEGL ETVRQSIITL EGMFDALAQQ RAPDEQQQLI SALDDIFHPA PVEESLPPTS
AEIIQLPGTQ STVAEIEPEP SAQVPVPALP QLTDEFDEQL LPIFLEEAVD LTRDLMAQLR
TWRGDPAGTA APKAIARLMH TFKGSARMAG AMNLGEVTHM LEARVEEAMR AGQATPAFID
EIETGCDTLV QAVERLRAGP QEPEVTEVPA VEGETATPVV VQPLHVEAEP ETDVSGQRAT
LRVRADLIDR LVNEAGELSI ARTRIEGEMR SLKGSLLELT ENVIRLRRQL RDIEIQAESQ
IQARVANTPE SDADFDPLEL DRFTRFQELT RFMAESVNDV ATVQQNLLKN LDDANAAILA
QSRLNRSLQQ ELMGVRMLPF ASQTERLYRI VRQTAKETGK RANLDIIGGQ VDIDRSVLDK
MLAPIEHMLR NAVTHGIENR DQRLAAGKQE AGEIVVKIAQ EGNEIILSMS DDGKGLDTTR
IRTRAEAMGL LQPGQDADEA TLYDFIFQPG FSTATELTQL AGRGVGMDVV KTEVAELGGR
IEILSQPGHG TTFRLYLPLT LAVTQTLLIR AGSHLYAVPS TMIEQVMEMK EKALAVYREQ
GEVTWQGNRY PFQYLPHLLG DTQAVPELHR QYWVLLLRSG SQRVAILVDE LKGNQEVVVK
NIGVQLARVV GIAGATVLGD GKVVLILNPV ALASRVPVSG APAVVAAVPA APEPVATAVE
MLPTVMVVDD SLTVRKITSR LLMREGYQVI LAKDGVDALE QLIDVMPDVI LSDIEMPRMD
GFDLVRNIRA EERLRSVPII MITSRTADKH RNYALEIGAN HYLGKPYDEV ELLSLIDGYA
KARRAH