Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3869 |
Symbol | ubiB |
ID | 3567753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 4160421 |
End bp | 4161941 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637682343 |
Product | putative ubiquinone biosynthesis protein UbiB |
Protein accession | YP_287067 |
Protein GI | 71909480 |
COG category | [R] General function prediction only |
COG ID | [COG0661] Predicted unusual protein kinase |
TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.838483 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATCC TTCGCCTGCT CAAGATCGCC TCTGTCGCCA GCCGTTTCGG CCTGGACGAG ATGGTGCTCG AACACGAGCC GAGCGGCCGC TTGGTGCGCA TCGCCAATGC CCTGCAATTC TGGCGCGACC TGTCCACGCC ACGTGCCGTC CGCCTGCGCC TTGCCCTGGA GTCACTGGGC CCGATTTTCG TCAAGTTCGG CCAGGTGCTG TCCACCCGGC GCGACCTGAT GCCCCCCGAC ATTGCCGACG AGCTGGCCCG CTTGCAGGAT CGCGTTCCAC CTTTCGACTC CGCGCTCGCC CTAGCCGAAA TCGAAAAGGC CTATGGCCGT CCGGCCAGCG AAGTTTTTGC CGAATTCGAC GCGACGCCAA TTGCCTCCGC CTCGATCGCC CAGGTCCATT TCGCCAAGTT GCGCGAAGAG GATGGCGGCC ATGAAGTCGC CGTCAAGATC CTGCGCCCCA ACATGCTGTC GGTCATCGAG CACGATCTGG CGCTGATGGA CAACCTGGCC ATGCTGCTTG AAAAGCTGTG GTCGGACGGC AAGCGCCTGA AGCCGCGCGA AGTGGTCGCT GAATTCGCCA AGTATCTGCG CGATGAGCTC GATCTGATGC GCGAAGCCGC CAACGCCTCG CAACTGCGCC GCAACTTTAC CGACTCGCAG TTGCTGATCG TGCCCGAGGT GCATTGGGAT TTCTGCACCT CGACGGTCAT GGTCATGGAG CGCATGAAGG GCACGCCGAT CTCGCAGATC GACAAGCTGC GCGCCGACGG CATCGACCTC TCCAAACTAT CGGCGGCCGG CGTCGAAATC TTCTTCACGC AGGTCTTCCG CGACGGCTTC TTCCACGCCG ACATGCACCC GGGCAACATC TTCGTCGCCC CCGATGGCCG CTACATCGCG CTCGATTTCG GCATCGTCGG CACGCTGACC GATTCTGACA AGAATTACCT CGCCCAGAAC TTCCTCGCCT TCTTCCGTCG CGACTACAAG CGTGTCGCCG AGGCGCACAT CGAATCCGGC TGGGCGCCGA AAGACACCCG CGTCGACGAG TTCGAAGCGG CCATTCGCGC CGTCTGCGAA CCGATTTTCG ACCGCCCGCT GAAGGACATC TCTTTCGGCA AGATCCTGCT CCGCCTGTTC CAGACCTCGC GCCGCTTCAA CGTCGAGATC CAGCCGCAAC TGGTCATGCT GCAGAAGACC CTGCTCAACA TCGAGGGCCT CGGCCGCCAG CTCGATCCTG AACTCGACCT GTGGAAAACC GCCAAGCCTT TCCTCGAGCG CTGGATGAGC GAGCAGATCG GCTGGCGAGG CCTGATCAAG ACCTTCAAGC AGGAAGCGCC CTATCTGGCG CGGACCATTC CACAACTACC GCGCCTCGTC CATCAGGCGC TGTCCAACCC GACCAAGGCC GACCTGCAAC CTCAACTCGC CCAACTGATC GCCGCCCAGC ATCAGCAGAA TCGCTGGCTG GCCATTATCG CCCTGCTGCT CGCCCTGCTC GTCGGCGCGC TGTTCGCCTG A
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Protein sequence | MRILRLLKIA SVASRFGLDE MVLEHEPSGR LVRIANALQF WRDLSTPRAV RLRLALESLG PIFVKFGQVL STRRDLMPPD IADELARLQD RVPPFDSALA LAEIEKAYGR PASEVFAEFD ATPIASASIA QVHFAKLREE DGGHEVAVKI LRPNMLSVIE HDLALMDNLA MLLEKLWSDG KRLKPREVVA EFAKYLRDEL DLMREAANAS QLRRNFTDSQ LLIVPEVHWD FCTSTVMVME RMKGTPISQI DKLRADGIDL SKLSAAGVEI FFTQVFRDGF FHADMHPGNI FVAPDGRYIA LDFGIVGTLT DSDKNYLAQN FLAFFRRDYK RVAEAHIESG WAPKDTRVDE FEAAIRAVCE PIFDRPLKDI SFGKILLRLF QTSRRFNVEI QPQLVMLQKT LLNIEGLGRQ LDPELDLWKT AKPFLERWMS EQIGWRGLIK TFKQEAPYLA RTIPQLPRLV HQALSNPTKA DLQPQLAQLI AAQHQQNRWL AIIALLLALL VGALFA
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