Gene Daro_3869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3869 
SymbolubiB 
ID3567753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4160421 
End bp4161941 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content63% 
IMG OID637682343 
Productputative ubiquinone biosynthesis protein UbiB 
Protein accessionYP_287067 
Protein GI71909480 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID[TIGR01982] 2-polyprenylphenol 6-hydroxylase 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.838483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCC TTCGCCTGCT CAAGATCGCC TCTGTCGCCA GCCGTTTCGG CCTGGACGAG 
ATGGTGCTCG AACACGAGCC GAGCGGCCGC TTGGTGCGCA TCGCCAATGC CCTGCAATTC
TGGCGCGACC TGTCCACGCC ACGTGCCGTC CGCCTGCGCC TTGCCCTGGA GTCACTGGGC
CCGATTTTCG TCAAGTTCGG CCAGGTGCTG TCCACCCGGC GCGACCTGAT GCCCCCCGAC
ATTGCCGACG AGCTGGCCCG CTTGCAGGAT CGCGTTCCAC CTTTCGACTC CGCGCTCGCC
CTAGCCGAAA TCGAAAAGGC CTATGGCCGT CCGGCCAGCG AAGTTTTTGC CGAATTCGAC
GCGACGCCAA TTGCCTCCGC CTCGATCGCC CAGGTCCATT TCGCCAAGTT GCGCGAAGAG
GATGGCGGCC ATGAAGTCGC CGTCAAGATC CTGCGCCCCA ACATGCTGTC GGTCATCGAG
CACGATCTGG CGCTGATGGA CAACCTGGCC ATGCTGCTTG AAAAGCTGTG GTCGGACGGC
AAGCGCCTGA AGCCGCGCGA AGTGGTCGCT GAATTCGCCA AGTATCTGCG CGATGAGCTC
GATCTGATGC GCGAAGCCGC CAACGCCTCG CAACTGCGCC GCAACTTTAC CGACTCGCAG
TTGCTGATCG TGCCCGAGGT GCATTGGGAT TTCTGCACCT CGACGGTCAT GGTCATGGAG
CGCATGAAGG GCACGCCGAT CTCGCAGATC GACAAGCTGC GCGCCGACGG CATCGACCTC
TCCAAACTAT CGGCGGCCGG CGTCGAAATC TTCTTCACGC AGGTCTTCCG CGACGGCTTC
TTCCACGCCG ACATGCACCC GGGCAACATC TTCGTCGCCC CCGATGGCCG CTACATCGCG
CTCGATTTCG GCATCGTCGG CACGCTGACC GATTCTGACA AGAATTACCT CGCCCAGAAC
TTCCTCGCCT TCTTCCGTCG CGACTACAAG CGTGTCGCCG AGGCGCACAT CGAATCCGGC
TGGGCGCCGA AAGACACCCG CGTCGACGAG TTCGAAGCGG CCATTCGCGC CGTCTGCGAA
CCGATTTTCG ACCGCCCGCT GAAGGACATC TCTTTCGGCA AGATCCTGCT CCGCCTGTTC
CAGACCTCGC GCCGCTTCAA CGTCGAGATC CAGCCGCAAC TGGTCATGCT GCAGAAGACC
CTGCTCAACA TCGAGGGCCT CGGCCGCCAG CTCGATCCTG AACTCGACCT GTGGAAAACC
GCCAAGCCTT TCCTCGAGCG CTGGATGAGC GAGCAGATCG GCTGGCGAGG CCTGATCAAG
ACCTTCAAGC AGGAAGCGCC CTATCTGGCG CGGACCATTC CACAACTACC GCGCCTCGTC
CATCAGGCGC TGTCCAACCC GACCAAGGCC GACCTGCAAC CTCAACTCGC CCAACTGATC
GCCGCCCAGC ATCAGCAGAA TCGCTGGCTG GCCATTATCG CCCTGCTGCT CGCCCTGCTC
GTCGGCGCGC TGTTCGCCTG A
 
Protein sequence
MRILRLLKIA SVASRFGLDE MVLEHEPSGR LVRIANALQF WRDLSTPRAV RLRLALESLG 
PIFVKFGQVL STRRDLMPPD IADELARLQD RVPPFDSALA LAEIEKAYGR PASEVFAEFD
ATPIASASIA QVHFAKLREE DGGHEVAVKI LRPNMLSVIE HDLALMDNLA MLLEKLWSDG
KRLKPREVVA EFAKYLRDEL DLMREAANAS QLRRNFTDSQ LLIVPEVHWD FCTSTVMVME
RMKGTPISQI DKLRADGIDL SKLSAAGVEI FFTQVFRDGF FHADMHPGNI FVAPDGRYIA
LDFGIVGTLT DSDKNYLAQN FLAFFRRDYK RVAEAHIESG WAPKDTRVDE FEAAIRAVCE
PIFDRPLKDI SFGKILLRLF QTSRRFNVEI QPQLVMLQKT LLNIEGLGRQ LDPELDLWKT
AKPFLERWMS EQIGWRGLIK TFKQEAPYLA RTIPQLPRLV HQALSNPTKA DLQPQLAQLI
AAQHQQNRWL AIIALLLALL VGALFA