| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3866 |
|---|
| Symbol | argS |
|---|
| ID | 3567750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 4156345 |
|---|
| End bp | 4158108 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637682340 |
|---|
| Product | arginyl-tRNA synthetase |
|---|
| Protein accession | YP_287064 |
|---|
| Protein GI | 71909477 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0018] Arginyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00456] arginyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 0.42649 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCAAG ACGTCAAAAC CCAGCTGACC GCCCTGTTGC AACAGGCACT GGCCAGCGTT
GCACCTGCTG CAACCGATAC CCCCATTCAC CTCGAGCGCC CGCGCGATCC GACGCATGGC
GACTTCGCGA CCAACTTGGC CATGCAATTG GCCAAGGCGC TGAAGAAGAA CCCGCGCGAA
ATCGCCAATC AGCTGCTGGC TGAGTTACCT CCCTCCAGGC TGGTGACCAA GGCTGAAGTG
GCCGGGGCGG GCTTCATCAA TTTCACGCTT GATGCCGGCT TCAAGACCGA TGTTGTCAAG
GCCGTGCTGG CCGAAGGCGA TAATTTTGGC CGCTCGAACC AGGGTGGCTG GCAGAAAGTG
CAAGTCGAAT TCGTGTCGGC CAACCCGACC GGCCCGCTGC ACGTCGGACA TGGTCGCGGT
GCTGCTTACG GCGCTTCGCT GTCCAGTCTG CTGACTTTCG CCGGCTGGGA CGTGACCCGC
GAGTATTACG TCAATGATGC CGGTCGTCAG ATGGACATCC TCGGTCTGTC GACCTGGTTG
CGCTACCTCG AACAGCACGG CGTCGATGTG CCCTTCCTGC CCAATGCCTA TCAGGGCGAC
TATGTACGCG ACATGGCCAA GCAGATGACG GTGGCGCATG GCGACAAATT CGTTCGTCCG
GCCGCCGACG TGCTGGCCGG GACGCCTGGC CTGCCTGAGG CCGAGCGTGC CGACGATGAA
GCCAAGCGCC AGCGCGACCT GCATCTCGAC GCCTTGATCG CCAATGCCAA GGTATTGCTT
GGCCCGGACT GGACCTATGT GCATCAGCAT GCCTTGTCCG AGCAATTGGC GGATGGCCGC
GACGATCTGG AAGAGTTCGG TGTCCATTTC GACGTCTGGT TCTCCGAGCA GGCGCTGTTC
GACACCGGCT TGGTCGCCCG TTGCGTCGAC CTGCTGGAAA AGAACGGTCA CCTGTATGTG
CAGAACGGTG CCCGCTGGTT CAAGTCGACC ACTTTCGGTG ACGAGAAGGA CCGCGTTGTC
CAGCGCGAAA ATGGCCTCTA CACCTATTTC GCCTCCGATA TTGCCTATCA TCTGAACAAG
TTCGAGCGTG GCTTCGACAA GGTCATCAAT ATCTGGGGTG CCGATCACCA CGGCTACATC
GCCCGCGTAA ACGGGGCGAT CACCGCGTTG GGGCTGGATG CCAGCAAGTT GCAGGTCGCA
CTGGTCCAGT TCGCCGTGCT CTACCGCAAC GGCCAGAAGG CCTCGATGTC GACGCGCTCC
GGCGAGTTTG TCACCCTGCG CGAATTGCGC GGTGAAGTTG GTAACGATGC CTGCCGCTTC
TTCTATGCGC TGCGCAAGTC CGACCAGCAC CTCGATTTCG ACCTTGATCT GGCCAAGAGC
CAGACCAACG AGAACCCGGT CTATTACATC CAGTACGCTC ATGCCCGCGT CTGCTCGGTG
ATCAACCAGT GGGGCGGCGA TCTGGCCACT TTGGCCGATG CCAATCTGGC GCTGCTCGAC
AACCCGCGCG AACTGGCCAT TGCCAGCAAG CTGGCTGAAT TCCGTGACGT CATCGATGGC
GCCGCCCGCG AATTGGCGCC GCACCTGATT GCCTTCTACC TGAAGGATCT GGCTGGTGAA
TTCCACGGCT GGTACAACGC CGAACGCATG CTGGTCGATG ATGCTGCACT GCGCGATGCT
CGCGTCGCGC TGGCCGCTGC CGTGCGCCAG ACGATCCGTA ACGGCATGAC GATCCTCGGT
GTCAGCTGCC CGGATTCGAT GTAA
|
|---|
| Protein sequence | MAQDVKTQLT ALLQQALASV APAATDTPIH LERPRDPTHG DFATNLAMQL AKALKKNPRE
IANQLLAELP PSRLVTKAEV AGAGFINFTL DAGFKTDVVK AVLAEGDNFG RSNQGGWQKV
QVEFVSANPT GPLHVGHGRG AAYGASLSSL LTFAGWDVTR EYYVNDAGRQ MDILGLSTWL
RYLEQHGVDV PFLPNAYQGD YVRDMAKQMT VAHGDKFVRP AADVLAGTPG LPEAERADDE
AKRQRDLHLD ALIANAKVLL GPDWTYVHQH ALSEQLADGR DDLEEFGVHF DVWFSEQALF
DTGLVARCVD LLEKNGHLYV QNGARWFKST TFGDEKDRVV QRENGLYTYF ASDIAYHLNK
FERGFDKVIN IWGADHHGYI ARVNGAITAL GLDASKLQVA LVQFAVLYRN GQKASMSTRS
GEFVTLRELR GEVGNDACRF FYALRKSDQH LDFDLDLAKS QTNENPVYYI QYAHARVCSV
INQWGGDLAT LADANLALLD NPRELAIASK LAEFRDVIDG AARELAPHLI AFYLKDLAGE
FHGWYNAERM LVDDAALRDA RVALAAAVRQ TIRNGMTILG VSCPDSM
|
|---|
| |