Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3851 |
Symbol | rph |
ID | 3568022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 4144744 |
End bp | 4145460 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637682325 |
Product | ribonuclease PH |
Protein accession | YP_287049 |
Protein GI | 71909462 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 0.92407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCCA GCCAACGCCA GCCGGACCAG CTTCGTACCG TCCGCATCAC CCGCAATTTC ACGCGCCACG CCGAAGGCTC GGTGCTGATC GAAATGGGTG ATACCCGCGT GCTATGCACG GCCAGCGTCG AAGAAAATGT GCCGCCCTTC CTGCGCGGCA AGGGCCAGGG CTGGGTCACG GCCGAATACG GCATGCTGCC GCGTGCCACG CACACCCGCT CTTCTCGCGA AGCCGCCAAG GGCAAGCAGA CCGGCCGGAC GCAGGAAATC CAGCGCCTGA TCGGCCGCGC CCTGCGCTCG GTCATTGACC TGAAAGCCCT TGGTGAGCGC CAGATCACGC TCGACTGCGA CGTCCTGCAG GCCGATGGCG GCACCCGCTG CGCCTCGATC ACCGGCGCCT GGGTTGCCCT CTACGAAGCC TGCGACAAGC TGGTCCAGGC CGGCAAGCTG CCCGCCAACC CGGTGCGCGA CCATGTCGCA GCCATTTCGG TCGGCATCTA CAAAGGCGCA CCGGTCCTCG ACCTCGACTA CCCGGAGGAC TCCGACTGCG ACACCGACAT GAACGTCGTG ATGACCGGCG CCGGTGGCAT TGTCGAAATA CAGGGCACCG CCGAAGGCGA GCCATTCACC CGTGAGCAGA TGAGCGTACT GGTCGACCTG GCCACACTCG GTGTTCGCCA CCTTGTCGCC GCCCAGCAAT CCGCCCTCGC CGCATGA
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Protein sequence | MRPSQRQPDQ LRTVRITRNF TRHAEGSVLI EMGDTRVLCT ASVEENVPPF LRGKGQGWVT AEYGMLPRAT HTRSSREAAK GKQTGRTQEI QRLIGRALRS VIDLKALGER QITLDCDVLQ ADGGTRCASI TGAWVALYEA CDKLVQAGKL PANPVRDHVA AISVGIYKGA PVLDLDYPED SDCDTDMNVV MTGAGGIVEI QGTAEGEPFT REQMSVLVDL ATLGVRHLVA AQQSALAA
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