Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3843 |
Symbol | |
ID | 3568014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 4134700 |
End bp | 4136853 |
Gene Length | 2154 bp |
Protein Length | 717 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637682317 |
Product | RelA/SpoT protein |
Protein accession | YP_287041 |
Protein GI | 71909454 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTCCG TACCGTCAAC TCAGCCGCCT GCTTATGAGG AAGCCGCTTA CCAGGTCTTC CTCGATAGTC TCGAATACCT ATCTCCCGTT GATGTAGAGA GAATCAAGGC GGCGTATGCC TACGCCGCCC GTGCGCACGC CAGTCAGCGG CGCATGTCCG GCGAGCCCTA CATCACTCAC CCGCTGGCCG TGGCTGGCGC GGTCGTCGAG TGGCGGATGG ATGCCGATGC GGTGGCGGCT GCGCTTCTGC ACGATGTGCT GGAAGATACC GGCGCCACCA AGCACGAACT GGCCGAAAAA TTCGGCAAGG AAGTGGCTGA ACTCGTCGAT GGCCTGTCCA AGCTCGACAA GATGGAGTTC GCTTCCTATC AGGAGGCGCA GGCCGAGAAT TTCCGCAAGA TGCTGATGGC CATGGCGCGC GATTTGCGCG TTGTGCTGAT CAAGCTCGCA GACCGCCAGC ACAATCTGGC GACAATGTCG GCCATGCGCG CCGACAAGCG TGCCCGCATT GCCCGGGAAA CGCTGGAAAT CTACGCGCCG ATTGCACTGC GCCTGGGGCT GAACAAGCTC TACCGCGAGT TGCAGGATAC GTCGTTCGAG CTGATCCACC CGCACCGTGC CGAGGTGCTG GCCAAGGCGC TCAGTGCGGC ACGTGGTAAC CGCCGGGAAT TGCTGACCCA GATTCTCAAC GGCATTCAGG ACAAACTTCG CCATGCCGGC TTGAAGGCCG AGGTTTTTGG CCGCGAAAAG AGCCTGTATT CGATCTTTCG CAAGATGAAG GACAAGCATC TGTCGTTTTC GCAGGTGCTC GATATCTACG GTTTTCGGGT GGTTGTCGAC AATGTGCCGA CCTGCTATCT GGCACTCGGC GCCTTGCACA GCCTTTTCAA GCCGGTTCCC GGCAAGTTCA AGGACTACAT TGCGATCCCC AAGGCCAATG GCTACCAGTC CTTGCACACG ACCCTGATCG GTCCTTACGG TACGCCGGTC GAAGTCCAGA TTCGCACCCG CGAAATGCAC CATGTGGCGC AGGAAGGCGT TGCGGCGCAC TGGCTGTACA AGGACATGGA CGAAACTAGC GCCGATCTGC AGATCAAGAC GCACAAGTGG TTGCAGTCGC TGCTCGAAAT GCAGACTAGC GATTCGTCCG AGTTCTTCGA GAACGTCAAG ATCGACCTCT TCCCCGATGA AGTCTATGTC TTTACGCCCA AGGGCAAGAT CATGGCCATG CCGCGCGGGG CGACGGTGGT TGATTTTGCC TACGCGGTGC ACACTGACGT CGGTCATCAT TGCTCGGCCG TGCGGATCAA TCACGAGCTG TCGCCGCTGC GGAGCGAATT GCACAACGGC GATCTGGTCG AGATCATCAC CTCCGGGCAG GCCAGCCCCA ATCCGGTCTG GCTGACCTAC GTCAAGACCG GCCGCGCTCG CAGCAAAATT CGCCATTTCC TGCGCACCAT GCAGAATGAG GAATCGGCCC GCCTCGGCGA GCGCCTGCTG CGCCAGGAGC TGTTGTCGCT CGGCGTCGTG CCGATTTCGA TTCCGACCGA CGCCTGGGAT CAGCTGGTCA AGTCCGGTGG CCAGAAGTCG ATGGAAGAGA TTTACACCGA AATTGGTCTC GGCAAGCGTC TGCCTTCGGT TGTTGCCCGC CGTCTGCTGG CCCGCGAAGA CATGTCGCAC GATTCGCCGA GCAGCATGAC GCTGGCCATC CACGGCACCG AGGGCATGGC CATCCAGTTG GCGCGTTGCT GCCAGCCGAT TCCGGGCGAT CCGATCATCG GTTCGATCAA GAAGGGCACT GGCCTGGTGA TTCATACCCA CGATTGTCCG ACCATTCGCA AGTCGCGTTC GTCCGAGCCG CAGAAGTGGA TCGATGTCGA ATGGGAGCCC GAAGAGGGCA AGCTGTTCGA TATTCGCATC ACGGTCGAGG TCAAGAATGC GCGGGGCGTC TTGGCGCAAG TCGCTTCGGC GATTGCCGAA GCCGGCTCGA ATATCGAGCA TGTCTCGATG GATGCCGACC CGGAGCGTCT GTTCACTTCC CTCCGCTTCA CCATTCAGGT TGCCCACCGC AATCACCTGG CCGCCGTGAT GCGTGGCATG CGCCATATTC CGGAAGTGAC CCGGATTACC CGTGAAAGGG GAGGCGAGAC TTGA
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Protein sequence | MGSVPSTQPP AYEEAAYQVF LDSLEYLSPV DVERIKAAYA YAARAHASQR RMSGEPYITH PLAVAGAVVE WRMDADAVAA ALLHDVLEDT GATKHELAEK FGKEVAELVD GLSKLDKMEF ASYQEAQAEN FRKMLMAMAR DLRVVLIKLA DRQHNLATMS AMRADKRARI ARETLEIYAP IALRLGLNKL YRELQDTSFE LIHPHRAEVL AKALSAARGN RRELLTQILN GIQDKLRHAG LKAEVFGREK SLYSIFRKMK DKHLSFSQVL DIYGFRVVVD NVPTCYLALG ALHSLFKPVP GKFKDYIAIP KANGYQSLHT TLIGPYGTPV EVQIRTREMH HVAQEGVAAH WLYKDMDETS ADLQIKTHKW LQSLLEMQTS DSSEFFENVK IDLFPDEVYV FTPKGKIMAM PRGATVVDFA YAVHTDVGHH CSAVRINHEL SPLRSELHNG DLVEIITSGQ ASPNPVWLTY VKTGRARSKI RHFLRTMQNE ESARLGERLL RQELLSLGVV PISIPTDAWD QLVKSGGQKS MEEIYTEIGL GKRLPSVVAR RLLAREDMSH DSPSSMTLAI HGTEGMAIQL ARCCQPIPGD PIIGSIKKGT GLVIHTHDCP TIRKSRSSEP QKWIDVEWEP EEGKLFDIRI TVEVKNARGV LAQVASAIAE AGSNIEHVSM DADPERLFTS LRFTIQVAHR NHLAAVMRGM RHIPEVTRIT RERGGET
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