Gene Daro_3838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3838 
SymbolnapH 
ID3568197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4130500 
End bp4131405 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content60% 
IMG OID637682312 
Productquinol dehydrogenase membrane component 
Protein accessionYP_287036 
Protein GI71909449 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02163] ferredoxin-type protein, NapH/MauN family 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value0.497942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA TGGGCAACAA GAAGCGCATT GGCGCCGAAG CCGTCGAGGA AAAGGGCTGG 
TTGCGCGCCC ACAAGTGGCT AATCCTGCGT CGTCTGTCGC AGTTCGGTAT CCTTGCCCTG
TTCCTGCTCG GCCCGCTCGC CGGCATCTGG ATCGTCAAGG GCAACCTCAA CTACAGCTAT
ACGCTGAATT TCTTGCCGCT GACCGATCCC TACGTTGCGC TGCAATCGCT GATGACTGGT
CATGTGCCGG AAAAACAGGG CCTGATCGGC GTCGCCATTG CCTTGGTTTT CTATTTTTTG
GTTGGTGGGC GGGTCTATTG CAGCTGGGTT TGCCCGGTTA ACGTCGTGAC CGACGCGGCG
GGCTGGCTGC GTGACCGTCT GGGGATCAAG GGTGCTGGCA GCCTGTCGGC TCGCACGCGC
TACTGGATAC TCGGCATGAC CCTGCTCGGT TCGGCGCTGA CCGGTGTGGT GCTGTGGGAG
CTGATCAATC CGGTCTCGAT GCTGCATCGT GGGCTGATCT TCGGCCTTGG CTCGGCATGG
ATGATCGTCA TCGCCATTTT CCTGTTCGAC CTGTTCGTGA TGAATCGTGC CTGGTGCGGC
CGCCTTTGCC CGGTTGGTGC TTTCTACAGC CTGATTGGCC GCTGGAGCCC GTTGCGTGTC
TCGGCCGCGA AGCGCACGGC ATGCAACGAT TGCATGGATT GTTTCGAGGT CTGCCCTGAG
CCGCAGGTGA TTCGTCCCGC CCTGAAGGGG GAGGATAAGG GCGTTGGCCC GGTCATTCTG
GCACCGAGTT GCACCAATTG CGGTCGTTGT ATCGATGTCT GCTCGAAGGA GGTCTTTTCC
TTCGGGTTGC GCATCAATAA CCCGACTTCG ACGGCTGCCG CCATGGCTCA GCCCGAAGCC
AAATGA
 
Protein sequence
MSQMGNKKRI GAEAVEEKGW LRAHKWLILR RLSQFGILAL FLLGPLAGIW IVKGNLNYSY 
TLNFLPLTDP YVALQSLMTG HVPEKQGLIG VAIALVFYFL VGGRVYCSWV CPVNVVTDAA
GWLRDRLGIK GAGSLSARTR YWILGMTLLG SALTGVVLWE LINPVSMLHR GLIFGLGSAW
MIVIAIFLFD LFVMNRAWCG RLCPVGAFYS LIGRWSPLRV SAAKRTACND CMDCFEVCPE
PQVIRPALKG EDKGVGPVIL APSCTNCGRC IDVCSKEVFS FGLRINNPTS TAAAMAQPEA
K