Gene Daro_3747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3747 
Symbol 
ID3568412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4027678 
End bp4028178 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content62% 
IMG OID637682222 
ProductNLP/P60 
Protein accessionYP_286946 
Protein GI71909359 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value0.60725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.715068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATTC CAGCCCTGAT TCTGCTCTCC CTTTCAGCCT TGCTGCTTGC CGCTTGCGGC 
AGCCCAGGGC CGCGCTCTTC CGCCTCGACG GAAACTATAG CGCAAGCATC GCGTCCGGTC
AGTGAGAAGG GCACCGAGGT GGTTTTCTAC GCCATGGGGC TGATCGATAC CGGTTACCGC
TTCGGCGGCA AAAATCCGGA GGCCGGTCTC GATTGCAGCG GCATGGTCAG CTATATCTAC
GGGCAGGCGG CGGGGCTCAG GGTGCAGGGC AGCGCGGCAG ATATCGCCCG CAACGGCAAA
CCGATCGATC GGGCAGAGCT GCGGCCGGGC GATCTGGTGT TCTTCAATAC CCTGAATCGC
TCGTTCTCGC ATGTCGGCAT CTACATCGGC GAGACGCGCT TCATCCATGC GCCGTCGACC
AACGGCCGGG TTCGCATCGA CCGGCTGAGC GACACTTACT ACGCGCAGCG TTTCCAGGCC
GCCCGTACCT TCTTCGACTA A
 
Protein sequence
MRIPALILLS LSALLLAACG SPGPRSSAST ETIAQASRPV SEKGTEVVFY AMGLIDTGYR 
FGGKNPEAGL DCSGMVSYIY GQAAGLRVQG SAADIARNGK PIDRAELRPG DLVFFNTLNR
SFSHVGIYIG ETRFIHAPST NGRVRIDRLS DTYYAQRFQA ARTFFD