| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3714 |
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| Symbol | |
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| ID | 3568147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 3990834 |
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| End bp | 3993920 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637682187 |
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| Product | PAS |
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| Protein accession | YP_286913 |
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| Protein GI | 71909326 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.101634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAATT GCTGGCTAAG CATTGTTGCG GCCGTCTTCT GGCTGCTCTC CGGATTATCT
GTCGCGCATG GCATGGAGCC CGCCGGCACC GCGACCGAGG CCAAAAAACC GGCGAAATTC
GCCGTCCTGG CCTACCGCCC AAAAGCGGAA ACCGAAGCAC GCTGGCAACC GCTGATCGAC
TACCTCAACA GCATCCAGCC GAGCCAGCCG ATCACGCTGG TCGCGCTCAA TTACCCGGAG
CTCGAGGCCG CCGTCAGGAA CAAGCAGATC GATTTCGTCC TGACCCAACC GGCACATTAC
ATCCTGCTGG CCAAGCAGGA ACATTTGCTC TCGCCATTGG CCACGCTGGT TGAAAAAGAA
GGCGGCAAAG CACTGTCCAG TTTTGGCGGC GTAATCGTCA CCCGCAGCGA CAAGACAGAC
ATCCAGCAGC TCGCCGATCT GCGGGGAAAA CGTATCGCGG CCAGCAGCAT GGCATCGCTT
GGCGGCTATC AGATGCAGGC CTTCGAACTG TTGCAAGCAG GCATCCACCT GCCAAACGAC
GCCCGGATCA TCGAGACCGG GCAGCCCCAG GACAAGGCCA TTCAGGAATT GCTGGCCGGA
CGGGCCGACG CAGCCTTCGT TCGCACCGGC CTCCTCGAAG CCATGCAAAT GGAGAACAAG
CTGGATGCCA GGCAATTGCG GGTCATCAAC CCCCAGCCTC CCGGCGACTT TCCACTCGTC
CGGTCAACCC GGCTGTATCC GGAATGGCCA GTTGCCGCGA TGCCCTGGAC AGAAAACAAT
CTGGCGCGGC AGGTCGCTGC AGCCATTCTT TCCCTGCCGG CCGACGGGGA GACTGCGCGA
GCCATGAATA TTCATGGCTT CACCATTCCT GAAGACTACC GTCCAGTTGA TGAATTGATG
CGCCAGCTCC GCCTGTCGCC TTTTGATGCT CCGCCAAAGT TCACGATAAA TGATGTTTTC
GTGCAGTTCG GTGCCGTCAT TGCGGTGATC GCCATACTCG GCATCAGCGT CCTGATAGCC
ATCGTTCTGG CCCTGTTCCG TACGATACGC CGCCTCAAGG GCGAACGCTC GCGAACCAAG
GCGACGATGG CTCAACTCTC GGCCGCCGAA GCCCGCTTCC GGGCCATTTT CGACAACGTC
GAAACCCTGG CCATTCAGGG CTACCTGGCT GACGGTACCG TCGCCTACTG GAACAATGCA
TCGCAAACTA CCTATGGCTA CACCGCGCAG GAAGCGCTCG GCAAATCCCT GCTCGACCTG
ATCATCCCCC CCGCCATGCG CGAAGACGTC CGGGGCGCCG TGCAATGGAT GTTTTCCCAC
AAGACGGGCA TTCCACCGGG CCGGCTCAAA TTGCAGCGCA AGGATGGCAG CACGGTCGAG
GTCTATTCGA GCCATACCGT CATCGACACG GCCGATAAGG GGCCGATGAT GTTCTGCCTC
GACATCAACC TGACCGAACT GGTCCATACC GAGCAGGCGC TGATCGAGAG CGAATCCCGG
CAACGGATGA TTCTCCAGAC ACTGGGCGAA GGCGTCTACG GCACCGACCT CGACGGGGTT
TGCACCTTCA TCAATCCCGC CGCGCTGGAC TACCTTGGTC TCCAGGAAGA CGAGGCACTG
GGCAAGAACA CCCATACCCT CTTCCACCAC CATCGAGCCG ACGGCACGCC CTTGCCGCTG
GCCGAATGCC CACTGATCCT GACCGCCAGG GATGGCCAAA GCCGGCGCCT GGAGGATGTC
TTCTGGCGGA AAAATGGCGA ATGCTTTCCG GTGCGCCTGA CCATCACGGC CAAGCTACGC
GATGGCGTGA TTACCGGTGT CGTCGTCTCG TTCGCCGACA TCAGCGAAAA CCGACGCGTG
GCCAAGGAAC TGGAACAACA TCACACCCAC CTTGAAGCGC AAGTCAGGCA ACGTACCGAA
CAACTGGAAA TTGCCCGCCA GGCGGCTGAA GCCGCCAATC GATCAAAGAG TGCCTTCCTG
GCCAACATGA GTCACGAGAT ACGCACGCCG CTCAACGCCG TGCTCGGCAT GGTGCACCTG
TTACGCCGTG ATGCACCAAC ACTGGAGCAG ATCGACCGCC TGGACAAGAT CGACTCGGCC
TCGCAGCATC TGCTGGCGGT GATCAACGAC ATCCTGGACA TCTCGAAAAT CGAGGCTGGA
AAACTGGTTC TCGACGAAAC AACCGTGGAC ATCACCAGCA TCCTGAAGCG TGTCGTATCC
GTGCTCGGCG ACCGTGCTCG CCAAAAGGGG CTCGAATTAC GTGTGCTGGC GGATGATTTC
CCCCATACCT TTATCGGCGA CCCGACGCGC ATCACCCAGT GCCTGATCAA TTACGCCGGC
AACGCGGTCA AGTTCACCGA GCATGGCAGC ATCACCCTCA AAGCCAGGCG CATGGCTGAT
GACAGCAACG GCGTACTGAT CCGCTTCGAA GTCGAAGATA CGGGCATTGG CATCTCCGAT
GATGCCATCG ATCGCCTGTT CGGCATCTTT GAGCAGGCCG ACAGTTCGAC CAGCCGGAAA
TTCGGCGGCA CCGGTCTGGG CCTGGCCATC ACCCGACGCC TGGCCGAACT GATGGGCGGC
AAGGTCGGCG TCAGCAGCCG CGTCGGCGCC GGCAGCCGCT TCTGGTTTAC GGCGCAGTTG
AAACCCGGCG ACGACGCCGT CGATGCCATG ACCTCAACCT TTGCCGGCCT TACCGCCAAA
GGCGTTCAGA ACAGCCTGCG CGGACGGCAT CTGCTGGTCG TTGAAGACGA GGCGATCAAC
CGCGAAATTG CGCTGGAACT CCTCGGCGAG TTCGGGATCA CCGCAGATAC CGCCGAAAAC
GGGCGCCACG CGGTCGAATT GATCAAGATC CAGCACTACG ATCTGGTCCT GATGGACATG
CAGATGCCGG AAATGGATGG CCTGGAAGCT ACCCGCCGGA TTCGCGCCCT GCCCGAGCAA
AACGCCGTAC CGATCATCGC CATGACCGCC AATGCGTTCG CCGAAGACCG CGAGCGCTGT
ATCAAGGCTG GCATGAACGA CTTCCTGTCG AAGCCGGTTG AACCCGACGA CCTCAAGATG
CTGCTGCTAC GCTACCTCGT CCATTAA
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| Protein sequence | MVNCWLSIVA AVFWLLSGLS VAHGMEPAGT ATEAKKPAKF AVLAYRPKAE TEARWQPLID
YLNSIQPSQP ITLVALNYPE LEAAVRNKQI DFVLTQPAHY ILLAKQEHLL SPLATLVEKE
GGKALSSFGG VIVTRSDKTD IQQLADLRGK RIAASSMASL GGYQMQAFEL LQAGIHLPND
ARIIETGQPQ DKAIQELLAG RADAAFVRTG LLEAMQMENK LDARQLRVIN PQPPGDFPLV
RSTRLYPEWP VAAMPWTENN LARQVAAAIL SLPADGETAR AMNIHGFTIP EDYRPVDELM
RQLRLSPFDA PPKFTINDVF VQFGAVIAVI AILGISVLIA IVLALFRTIR RLKGERSRTK
ATMAQLSAAE ARFRAIFDNV ETLAIQGYLA DGTVAYWNNA SQTTYGYTAQ EALGKSLLDL
IIPPAMREDV RGAVQWMFSH KTGIPPGRLK LQRKDGSTVE VYSSHTVIDT ADKGPMMFCL
DINLTELVHT EQALIESESR QRMILQTLGE GVYGTDLDGV CTFINPAALD YLGLQEDEAL
GKNTHTLFHH HRADGTPLPL AECPLILTAR DGQSRRLEDV FWRKNGECFP VRLTITAKLR
DGVITGVVVS FADISENRRV AKELEQHHTH LEAQVRQRTE QLEIARQAAE AANRSKSAFL
ANMSHEIRTP LNAVLGMVHL LRRDAPTLEQ IDRLDKIDSA SQHLLAVIND ILDISKIEAG
KLVLDETTVD ITSILKRVVS VLGDRARQKG LELRVLADDF PHTFIGDPTR ITQCLINYAG
NAVKFTEHGS ITLKARRMAD DSNGVLIRFE VEDTGIGISD DAIDRLFGIF EQADSSTSRK
FGGTGLGLAI TRRLAELMGG KVGVSSRVGA GSRFWFTAQL KPGDDAVDAM TSTFAGLTAK
GVQNSLRGRH LLVVEDEAIN REIALELLGE FGITADTAEN GRHAVELIKI QHYDLVLMDM
QMPEMDGLEA TRRIRALPEQ NAVPIIAMTA NAFAEDRERC IKAGMNDFLS KPVEPDDLKM
LLLRYLVH
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