| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3653 |
|---|
| Symbol | |
|---|
| ID | 3567595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 3925937 |
|---|
| End bp | 3927400 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637682126 |
|---|
| Product | ATPas |
|---|
| Protein accession | YP_286852 |
|---|
| Protein GI | 71909265 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4916] Uncharacterized protein containing a TIR (Toll-Interleukin 1-resistance) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 5.96179e-19 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTGGCAC TAAAAACAGC AGGGCGTGGG ATTGTGGTTG AAGGGCCATC CGGAATCGGA
AAAACGACTT CAGTTATTAA TGCCATCAAA GATGCTGGAT TGGCTGAAAA AGTATTGGTG
TTGTCAGCAA GAAAAGCTGA TGAGGTAGAG TTGATTAAGG AATTGCCAAA GCAAGTTCCA
TTTGGAGTCG TGGTTATTGA CGATTTTCAT CGGCTTGATA GAAAAGTAAA AAAACAAATT
GCCGATTTAA TGAAGTCCCT TGCGGACGAT GGGGCTGCTC ACAGTAAAAT TATTATTCTT
GGCATCACCA ATGCCGGGCA AACTCTAATC TCCTTCGGAA AAGATCTTGC CAATAGAATC
GAAGTAATTC CCTTTGAGGC AAATCCTGAG TATAAAGTTG AGGAGTTAAT CAAAAAGGGG
GAATTGGCGC TAAATATAAA TATAAACATC GCTAGCGATA TTGTAAAAGA CGCCCAAGGT
AGTTTCTATT TGGCTCAGAT GCTGGCATAC AATACATGCC TCCGGGCTGG AATACTGAAG
TGGAGCGAAA GTCTAATTGA AACCCAGGAA AGTCATGAGT CTGTCAAGAC GCAAGTCATG
ACGGCGCTAT CACGAATATT TCACGATACT GCTATAAGTT TTGCTAGGGG AACAAAGTTA
AGAAGAGAGG GGCGCGCCCC TTACTTGCAT CTCTTATATT GGCTTAGTCA AAGTAAGACT
TGGGTTATTA ATGCGGAAAG AGAGGCCGAC CGTCATCCAG AGCAAAGAGG AAGCGTATCT
CAAGTTGTTA CAAAGGGGTT TCTGGAGGAA TTAATTTCGT CATCGGATGA CCTTCAAAAG
GTTTTGCATT TTGATAACAC GAGTGGCAAC TTGGCTATTC AAGATCCACA GTTTGTGTTC
TACATTAGAA ATCTGTCATG GCCTCAATTT GCAGACGAAG TTGGTTTTAT ATCTCTTGAG
TTTCCTTCTC GTTATGACTT CGCCTTGTCA TTTGCCGGAT CGGACCGAGA TATTGCAGAG
GCGATATTTA ATTGCCTCTC TGAAAACGAG CTTGAAGTTT TCTACGACAA GAATGAGCAA
CACCGCATAC TTGCGCAAGA TGTGGAGGAG TATTTGGCTC CAATCTACGC ATCAGATGCC
CAGTTCGTTG TTTGCATTCT TGGACCGGAT TACCCGAAGA AAATTTGGAC CAAATTTGAA
TCGAGCCAGT TTAAGCAAAG GTTTAAATCT GGTGATGTCA TTCCTATTGT TTTGTCGAGT
GCTCCTCTTG GAGTTTTTGA TACTGCTACG AGTGTAGGAT ATTTGCCTTG GGATAGGGCT
AGTGTATTTG AATATCAGCT TAAAAACGTT GTTGAAACGC TATTGAAGAA ATGCGCTGAA
ACTCGAAGCA GCCGAAGGCA CGAATTTGAT GGCGACAATA ATTTTCTGAC TGAACAAATT
GCTCTCAACC TCGTTGCCGA ATAA
|
|---|
| Protein sequence | MVALKTAGRG IVVEGPSGIG KTTSVINAIK DAGLAEKVLV LSARKADEVE LIKELPKQVP
FGVVVIDDFH RLDRKVKKQI ADLMKSLADD GAAHSKIIIL GITNAGQTLI SFGKDLANRI
EVIPFEANPE YKVEELIKKG ELALNININI ASDIVKDAQG SFYLAQMLAY NTCLRAGILK
WSESLIETQE SHESVKTQVM TALSRIFHDT AISFARGTKL RREGRAPYLH LLYWLSQSKT
WVINAEREAD RHPEQRGSVS QVVTKGFLEE LISSSDDLQK VLHFDNTSGN LAIQDPQFVF
YIRNLSWPQF ADEVGFISLE FPSRYDFALS FAGSDRDIAE AIFNCLSENE LEVFYDKNEQ
HRILAQDVEE YLAPIYASDA QFVVCILGPD YPKKIWTKFE SSQFKQRFKS GDVIPIVLSS
APLGVFDTAT SVGYLPWDRA SVFEYQLKNV VETLLKKCAE TRSSRRHEFD GDNNFLTEQI
ALNLVAE
|
|---|
| |