| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3597 |
|---|
| Symbol | |
|---|
| ID | 3568261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 3854917 |
|---|
| End bp | 3855498 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637682070 |
|---|
| Product | OmpA/MotB |
|---|
| Protein accession | YP_286796 |
|---|
| Protein GI | 71909209 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 74 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000795687 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC TCACCTTGCT TTTCAGTACT CTGTTCCTTG CCGCTTGCGC ACAAGAGCGC
TACGTCTTGC TGCCCGATGC GTCCGGGCAA AGCGGCAGGC TGCTGGTTAA GCCCAGGCAA
TCGCCGCCGC TCACCCTTGA TCAACCCAAT GCCTTGTCGA CCTCCGGTTT CTGGGGGATT
GGCCAGCGGC GGGCAGAGGC CGACGAGGTT AAGGCCATTT GGGGCGGCTC CCTGGCGGCG
ACTCCCCAGC CCCCAAAGAA ATTCATGCTG TATTTCCTCG AAGGGACCAG CGAGTTGACC
GCGGATTCGA AAAAAGAACT GGACGGTGTT TTCGACGAAA TCAAGAAACG CAAGGTGACT
GATATCGTGG TCATCGGTCA TACCGACACG GTCGGTTCGC AGGAGTCCAA TGATCGTCTG
GCCGAGGCCA GAGCCAAGGC CATGCAGGCG GAACTGGAGC ACCTCGGTGT CGATGCCGGG
TCGATCAAGG TCAGTGGCCG TGGCGAACGC GAGCCCCTGG TCAAAACAGC CGATGAAGTC
GCCGAGCCGC TCAATCGGCG TGTCGAGATT CAGGTGCGTT GA
|
|---|
| Protein sequence | MKLLTLLFST LFLAACAQER YVLLPDASGQ SGRLLVKPRQ SPPLTLDQPN ALSTSGFWGI
GQRRAEADEV KAIWGGSLAA TPQPPKKFML YFLEGTSELT ADSKKELDGV FDEIKKRKVT
DIVVIGHTDT VGSQESNDRL AEARAKAMQA ELEHLGVDAG SIKVSGRGER EPLVKTADEV
AEPLNRRVEI QVR
|
|---|
| |