| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3571 |
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| Symbol | |
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| ID | 3566383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3825562 |
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| End bp | 3827397 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637682044 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_286770 |
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| Protein GI | 71909183 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTGA TGATTGACGA AGAAGTAATC GAGTTGCAAC GAATTATGGC CGAGGGGCTT
TTGTTCCCGG TTTTTCAGCC AATTCTCGAT TTTCGCGTGC GAGCCATTCT CGGGTATGAA
TCACTGATGC GCGGTCCGGT TGATAGTCCT TTGCATTGGC CGGATCAGCT TTTTGGCGCG
GCCGCCCGGC ATGGATTGAC GCTCGATCTG GAGCATGCCT GCCGGGAAGC CAGCTTGCGA
GCCTTTGCGG CGCAACGGCT GGCGGGGCGG CTTTTTCTCA ACGTGACACC GAGCTGTCTG
CTCGATCCCC GGCTGATGAA TGGCCATACC CGGGCTTTGC TCAATGAACT CGGGATTGCA
CCGAATCGTA TTGTGATCGA ATTGACTGAA AACCAGCAGA TCACCGATAT GCCGGGCATC
CTTGAGGCCT TGCAGCATTA TCGCGGGCGC GGCTTCCAGA TTGCCATCGA CGACCTCGGG
GAGGGCTTTG CCAACCTGCG CATGTGGTCC GAATTGAGGC CGGAGTTCGT CAAGATCGAC
AAGCATTTCA TCGGCGGGAT TGCCGACGAC CGGATCAAGT TCCACTTTGT GCGCGCGATG
CAGGATCTGG CTGAAATCTG CAATGCCTCG CTGGTCGCCG AAGGGATCGA GCGTTCCGAG
GATTTCATCT GCATTCGCGA CATGGGGATT GCTTGTGGCC AGGGCTATTT CATCTCCCGA
CCGTCAAGCC ATCCGTTACG CCACGTTGCC GGGCCGGTGA TGTCCGCGCT CGATCAGCAG
TCGCTTTCCC TGTCGCCGAT GACTGGCGGT CCCGGCAAGT TGCCAACCGC GCGAACGCTG
CTCAAGCCGA TCGAGGCCGT GCCGATGAAT GCCAGCAATG CCATGGTGAT TGCCCGTTTC
GAGGCCGATC CGGAACTCGA TGTCCTGCCT GTCGTGCAGG GTACCCAACC GGTCGGGATG
ATCAACCGGA ACAGCATGGT CGACCTCTTT GCCCGGCCTT TTCGCCGGGA GTTGTTCGGC
CGCAAGAGCT GTGAGCTGTT CATGGATCAG GCGCCGCTGG TGGTCGATCA GCATGCCACC
ATCCAGGAGC TGGCGATGAT GTTGTCAATG GCGCCAACAC GTTATCTGTC CGACGGATTC
ATCGTCACCG GCGATGGCAA ATATCTCGGC GTCGGGAGCA GTCGCGACCT GATGGCGACG
ATTACCGAAA TGCAGCTCAG TGCGGCCCGC TATGCCAATC CGCTGACCCA GTTGCCCGGT
AACGTGCCGA TCAACGAACA CGTCGACCGG ATGCTGTCGG CCGGCAACCC GTTTGTTGCG
GCCTATATCG ATATTGACGA CTTCAAGCCC TTCAACGATA CCTTCGGCTA TCGACGCGGC
GACGACGTGA TCCAGACTCT GGCCCGCCTG ATGTGTGAAG CCGCTGACGA ACGGATTGAC
TTCATCGGCC ATATCGGGGG CGATGACTTC TTCGTGATAT TCCGTAGCGT GGATTGGGAA
ATTCGCTGCT GGCAGATCAT CAGCCGCTTT GCCGAGGCCA TGGGCAGCAT GCTGGGCGTT
GAGGAGCGTC TGCGAGGTGG TTACATGGCG GAAAATCGAC GGGGAGAACT GAGCTTTCAG
CCTTTGCCGA CGCTCTCGAT CGGGGCGGTC CGGATTGGCC CGGGCGACTG CGAATCGCAC
CGCGAAGTAG CGGCGGCCGC CTCGGTCGCC AAGAAACAGG CGAAGAAAAA AGCCAAGCAG
ACGGCTAACG AACCCTTGGG CGGTAGTCTG TTCATCGAGC GCCGCCGCTT GGGGGCGGGC
GATGCCGTAT TGTCCGTGGC GCGAACTTTG AACTGA
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| Protein sequence | MILMIDEEVI ELQRIMAEGL LFPVFQPILD FRVRAILGYE SLMRGPVDSP LHWPDQLFGA
AARHGLTLDL EHACREASLR AFAAQRLAGR LFLNVTPSCL LDPRLMNGHT RALLNELGIA
PNRIVIELTE NQQITDMPGI LEALQHYRGR GFQIAIDDLG EGFANLRMWS ELRPEFVKID
KHFIGGIADD RIKFHFVRAM QDLAEICNAS LVAEGIERSE DFICIRDMGI ACGQGYFISR
PSSHPLRHVA GPVMSALDQQ SLSLSPMTGG PGKLPTARTL LKPIEAVPMN ASNAMVIARF
EADPELDVLP VVQGTQPVGM INRNSMVDLF ARPFRRELFG RKSCELFMDQ APLVVDQHAT
IQELAMMLSM APTRYLSDGF IVTGDGKYLG VGSSRDLMAT ITEMQLSAAR YANPLTQLPG
NVPINEHVDR MLSAGNPFVA AYIDIDDFKP FNDTFGYRRG DDVIQTLARL MCEAADERID
FIGHIGGDDF FVIFRSVDWE IRCWQIISRF AEAMGSMLGV EERLRGGYMA ENRRGELSFQ
PLPTLSIGAV RIGPGDCESH REVAAAASVA KKQAKKKAKQ TANEPLGGSL FIERRRLGAG
DAVLSVARTL N
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