Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3538 |
Symbol | |
ID | 3567616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 3789603 |
End bp | 3790322 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637682011 |
Product | hypothetical protein |
Protein accession | YP_286737 |
Protein GI | 71909150 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 0.739224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0386409 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGCA CAACGCCACC TGAAACAAGC CACCGCATCG CCATTGCCGG TGCGGACGTT TCCTACCAAC TGCGGCGCAG CCAGCGGCGC ACGATAGGCT TGACCATCGA CCATCGCGGC CTGCGGGTCG GTGCGCCGAC CCGGGCCCGG ATCGGCGATA TTGAAAAACT GATTCATCAG CACGGCGACT GGGTGCTCGA CAAGCTGGCC GCCTGGCGCG ACCGCCCGGT TCCCGGCAAA CAGGAAATCA CCGACGGCAC GATCATTTCC ATACTAGGCG AGCCGCTGAC CATTGCCCTG ACGACTGTCG GGCGTTCCCG CTGGCAATTC GGCCCCGGCA CCCTCTACCT TCACCCGGTC AGTACCGGTG CCATCAACGG CTTGCTTGAA AAGGCGCTGC GCGAGAAAGC GCGTGCTGTC TTTGCCGAGC GCCTGCAAAT CCACGCCCCC CGGCTCGGTG TCGCGACGCC ACCCTTGCGG CTTTCCTCTG CCCGAACCCG CTGGGGCAGC TGCAATCACC GAGGCGACAT CGCGCTGAAC TGGCGGCTCG TTTTCATGCC GCTGCCGGTG GTCGATTACG TCGTTTGCCA TGAATTGGCG CACCTCAAGG AAATGAACCA CAGCCCGCGC TTCTGGTCTG TGGTGGAACA ACTCTACCCG GACTGGAAAA CCCGACGCCT TGAACTGCGT CAGTTGGCCC GGCAAATCCC GCACCTCTAA
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Protein sequence | MPSTTPPETS HRIAIAGADV SYQLRRSQRR TIGLTIDHRG LRVGAPTRAR IGDIEKLIHQ HGDWVLDKLA AWRDRPVPGK QEITDGTIIS ILGEPLTIAL TTVGRSRWQF GPGTLYLHPV STGAINGLLE KALREKARAV FAERLQIHAP RLGVATPPLR LSSARTRWGS CNHRGDIALN WRLVFMPLPV VDYVVCHELA HLKEMNHSPR FWSVVEQLYP DWKTRRLELR QLARQIPHL
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