Gene Daro_3529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3529 
Symbol 
ID3567395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3780756 
End bp3781205 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content58% 
IMG OID637682002 
Producthypothetical protein 
Protein accessionYP_286728 
Protein GI71909141 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value0.603425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0221884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACG CACCCAGCAA CCGACTTAAT CTTTCGGTGC AATACGCCTG TAACCGGGAA 
GGGCTACCCT TGCGGGCAGA TTTCGTGCGC TGGGCACGTG CCGCGCTGGT TGGCGGCGGC
GAAGTCACCA TCCGCCTGGT CGACGCCGAC GAAGGCCAGT CGCTGAATAA GGAATACCGG
GGCAAGGATT ACGCAACCAA CGTGCTGTCC TTTCCCTACG ATACCGAACC GGTGGTGATG
GGCGATCTGG TCGTCTGCCC GAGCGTCGTG AGCAAGGAAG CGGCCGAGCA GAACAAGCCG
CTGGAGGCTC ATTACGCGCA CCTGACGGTG CATGGTATGC TGCATTTGCA GGGCTGGGAT
CATGACAATG ACGATGATGC CCAGGCGATG GAAGACGAAG AAAGGGAGAT TCTCGCTGCA
ATGGGTTATC CAGACCCGTA TGCGGTTTAA
 
Protein sequence
MKNAPSNRLN LSVQYACNRE GLPLRADFVR WARAALVGGG EVTIRLVDAD EGQSLNKEYR 
GKDYATNVLS FPYDTEPVVM GDLVVCPSVV SKEAAEQNKP LEAHYAHLTV HGMLHLQGWD
HDNDDDAQAM EDEEREILAA MGYPDPYAV