| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3523 |
|---|
| Symbol | |
|---|
| ID | 3567388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 3773077 |
|---|
| End bp | 3773631 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637681995 |
|---|
| Product | resolvase, N-terminal:resolvase helix-turn-helix region |
|---|
| Protein accession | YP_286722 |
|---|
| Protein GI | 71909135 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00000000000257012 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00040401 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGTC AAAACGTCGG CTACGTCAGA GTCAGCACCA TCGTCCAGAA CACGGCACGT
CAGCTTGAAG GTGTGGCGCT GGATGAAGTC TTCGAGGACA AGGCCAGTGG CAAGGACACA
TCCCGCCCCC AACTTGAGGC TTGCCTGAAG CATCTCCGCA AGGGAGACAC CCTGCACATC
CATAGCCTTG ATCGGCTAGG GCGCAACCTG GACGACCTCC GCAAGATCAT CAAGGAACTG
ACGGGGCGTG GTGTCGTTGT GAAGTCGCAC AAGGAAAACC TGACCTTCAC CGGCGATGAC
TCGCCTATGG CTAACCTGCT GTTGTCCATG CTGGGGGCGG TTGCCGAGTT CGAGCGTTCG
CTGATCCTTG AGCGGCAGCG TGAAGGCATC GCCATTGCCA AGGCCGCAGG TGCCTACAAG
GGTGGCAAGA AGAAGATGAA CGAGGAGCAA GCGCAGGAGT TACGTCGGAG AGCCGCAGCC
GGTGAAAAGA AAGCAGCCCT TGCGCGTGAG TTCGGTATCA GCCGCGAAAC GCTCTACTCC
TACCTCGGCC AGTAA
|
|---|
| Protein sequence | MSGQNVGYVR VSTIVQNTAR QLEGVALDEV FEDKASGKDT SRPQLEACLK HLRKGDTLHI
HSLDRLGRNL DDLRKIIKEL TGRGVVVKSH KENLTFTGDD SPMANLLLSM LGAVAEFERS
LILERQREGI AIAKAAGAYK GGKKKMNEEQ AQELRRRAAA GEKKAALARE FGISRETLYS
YLGQ
|
|---|
| |